RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 CD27P26842 260 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 IMPA1P29218 277 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 MAGEA9P43362 315 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 RABIFP47224 123 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 SLC6A12P48065 614 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 CLCNKAP51800 687 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 THOP1P52888 689 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 YPEL5P62699 121 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 CTBSQ01459 385 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 CLCQ05315 142 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 CLCA4Q14CN2 919 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 PCBP2Q15366 365 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMC6-204ENST00000428868 CFAP157Q5JU67 520 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 TCHHL1Q5QJ38 904 aaPredicted RBP8.65□□□□□ -1.02
SMC6-204ENST00000428868 ANKS6Q68DC2 871 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 CLEC6AQ6EIG7 209 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 CAPRIN2Q6IMN6 1127 aaKnown RBP8.65□□□□□ -1.02
SMC6-204ENST00000428868 MAMSTRQ6ZN01 415 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 SYVN1Q86TM6 617 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 CUZD1Q86UP6 607 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 SPATS2Q86XZ4 545 aaKnown RBP8.65□□□□□ -1.02
SMC6-204ENST00000428868 CRLF3Q8IUI8 442 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 OR52B6Q8NGF0 335 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 AGAP11Q8TF27 550 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 JPH3Q8WXH2 748 aaPredicted RBP8.65□□□□□ -1.02
SMC6-204ENST00000428868 PYCR2Q96C36 320 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 CCDC126Q96EE4 140 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 SPACA7Q96KW9 195 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 PPP1R36Q96LQ0 422 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 IL17FQ96PD4 163 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 CDK15Q96Q40 435 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 INSM2Q96T92 566 aaPredicted RBP8.65□□□□□ -1.02
SMC6-204ENST00000428868 IER2Q9BTL4 223 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 TMEM120AQ9BXJ8 343 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 NSRP1Q9H0G5 558 aaKnown RBP8.65□□□□□ -1.02
SMC6-204ENST00000428868 ATG10Q9H0Y0 220 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 MIR1-1HGQ9H1L0 117 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 RMI1Q9H9A7 625 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 TM9SF3Q9HD45 589 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 ARL15Q9NXU5 204 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 STOX2Q9P2F5 926 aaPredicted RBP8.65□□□□□ -1.02
SMC6-204ENST00000428868 HAO1Q9UJM8 370 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 SH2B3Q9UQQ2 575 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 PTGDR2Q9Y5Y4 395 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 DNMT3AQ9Y6K1 912 aaPredicted RBP8.65□□□□□ -1.02
SMC6-204ENST00000428868 USH1CQ9Y6N9 552 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 DMDP11532 3685 aa8.65□□□□□ -1.02
SMC6-204ENST00000428868 ZNF318Q5VUA4 2279 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 GOLGA4Q13439 2230 aaKnown RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 A0A0G2JND7 137 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 SPTY2D1-AS1A0A0U1RR47 76 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 HGSO14964 777 aaPredicted RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 MAP3K13O43283 966 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 CCNT2O60583 730 aaKnown RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 PRAMEF4O60810 478 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 SKAP2O75563 359 aaPredicted RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 ANXA5P08758 320 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 ENO2P09104 434 aaPredicted RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 ITPKAP23677 461 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 SERPINB3P29508 390 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 SH3BP2P78314 561 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 CDKL1Q00532 357 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 CSTF1Q05048 431 aaKnown RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 ASPHQ12797 758 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 TRAF3Q13114 568 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 PRKG2Q13237 762 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 TUBB3Q13509 450 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 GTF2H2Q13888 395 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 FASTKQ14296 549 aaKnown RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 PDCD2Q16342 344 aaPredicted RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 RBBP7Q16576 425 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 PTCHD3Q3KNS1 767 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 SLC9B1Q4ZJI4 515 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 USP39Q53GS9 565 aaKnown RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 SH2D4BQ5SQS7 431 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 PRAMEF14Q5SWL7 426 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 PRAMEF9Q5VWM5 478 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 SULT1C3Q6IMI6 304 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 GTF2H2CQ6P1K8 395 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 SLC30A9Q6PML9 568 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 RAB44Q7Z6P3 723 aaPredicted RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 WDR5BQ86VZ2 330 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 WDR75Q8IWA0 830 aaKnown RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 TEX9Q8N6V9 391 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 CADM4Q8NFZ8 388 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 PIWIL2Q8TC59 973 aaKnown RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 PPP4R1Q8TF05 950 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 PATE1Q8WXA2 126 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 SREK1Q8WXA9 508 aaKnown RBP8.64□□□□□ -1.03
SMC6-204ENST00000428868 FBXL8Q96CD0 374 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 CNDP1Q96KN2 507 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 C12orf66Q96MD2 445 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 HGH1Q9BTY7 390 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 CD244Q9BZW8 370 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 DPEP2Q9H4A9 486 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 MID1IP1Q9NPA3 183 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 KLHL14Q9P2G3 628 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 TBC1D29Q9UFV1 150 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 TMCO1Q9UM00 188 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 ASF1AQ9Y294 204 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms