RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 GOLGA6L19H0YKK7 550 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 CNOT3O75175 753 aaKnown RBP17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 CRTAMO95727 393 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 UMODP07911 640 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 UGT2B7P16662 529 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 PER3P56645 1201 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 BOP1Q14137 746 aaKnown RBP17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 ZIC1Q15915 447 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 HIF1AQ16665 826 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 NKAIN1Q4KMZ8 207 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 TFDP3Q5H9I0 405 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 SNX20Q7Z614 316 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 OR8K1Q8NGG5 319 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 GORASP1Q9BQQ3 440 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 C10orf88Q9H8K7 445 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 SRPK3Q9UPE1 567 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 ICKQ9UPZ9 632 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 OSGIN2Q9Y236 505 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 CSAG2Q9Y5P2 127 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 FBN2P35556 2912 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 NUP210LQ5VU65 1888 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 ARHGAP10A1A4S6 786 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 H3BMH7 237 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 H7C0C1 242 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 CCL22O00626 93 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 LRRTM2O43300 516 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 PSTPIP1O43586 416 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 CTSBP07858 339 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 ATP5OP48047 213 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 ZNF140P52738 457 aaPredicted RBP17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 SOX8P57073 446 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 AIMP2Q13155 320 aaKnown RBP17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 RPA4Q13156 261 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 ZNF658BQ4V348 819 aaPredicted RBP17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 ITPRIPL1Q6GPH6 555 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 RANBP10Q6VN20 620 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 KCNMB4Q86W47 210 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 CCDC50Q8IVM0 306 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 TMEM151BQ8IW70 566 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 MARVELD3Q96A59 401 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 DNAJC7Q99615 494 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 ZDHHC3Q9NYG2 299 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 FBXL4Q9UKA2 621 aa17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 NOVA2Q9UNW9 492 aaKnown RBP17.66■□□□□ 0.42
UPK3BP1-201ENST00000428678 hCG_1818297A0A087WSY0 165 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 AGPSO00116 658 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 HNRNPRO43390 633 aaKnown RBP17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 ALOX12BO75342 701 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 ELAVL4P26378 380 aaKnown RBP17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 RBL1P28749 1068 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 SHMT2P34897 504 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 ADRA1AP35348 466 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 GABRA4P48169 554 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 CDKN1CP49918 316 aaPredicted RBP17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 NAA30Q147X3 362 aaPredicted RBP17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 MRPL14Q6P1L8 145 aaKnown RBP17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 UNC5AQ6ZN44 842 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 OR5AR1Q8NGP9 310 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 PPP4R1Q8TF05 950 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 CCDC42Q96M95 316 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 PHF12Q96QT6 1004 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 OR2A14Q96R47 310 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 NDC1Q9BTX1 674 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 SPHK1Q9NYA1 384 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 TACC2O95359 2948 aa17.65■□□□□ 0.42
UPK3BP1-201ENST00000428678 IGLV3-16A0A075B6K0 115 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 A0A0J9YY10 115 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 CHRM5P08912 532 aaPredicted RBP17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 PSMB4P28070 264 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 MC4RP32245 332 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 GPR33Q49SQ1 333 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 IRAK1BP1Q5VVH5 260 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 TLDC1Q6P9B6 456 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 MICALCLQ6ZW33 695 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 TAS2R42Q7RTR8 314 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 SERPINA9Q86WD7 417 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 CLDN19Q8N6F1 224 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 GRHL3Q8TE85 626 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 MOCOSQ96EN8 888 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 CHP1Q99653 195 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 HEMGNQ9BXL5 484 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 SLC6A20Q9NP91 592 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 CDC23Q9UJX2 597 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 ENTPD4Q9Y227 616 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 ASF1AQ9Y294 204 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 TDRKHQ9Y2W6 561 aaKnown RBP17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 AAR2Q9Y312 384 aaKnown RBP17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 F8P00451 2351 aa17.64■□□□□ 0.41
UPK3BP1-201ENST00000428678 CELSR1Q9NYQ6 3014 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 SYCE3A1L190 88 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 E2F3O00716 465 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 ZG16O60844 167 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 ZRANB2O95218 330 aaKnown RBP eCLIP17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 TPM3P06753 285 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 PRSS56P0CW18 603 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 PRF1P14222 555 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 ALAS2P22557 587 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 ACRV1P26436 265 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 CDC16Q13042 620 aa17.63■□□□□ 0.41
UPK3BP1-201ENST00000428678 PRPSAP1Q14558 356 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms