RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 GLIS1Q8NBF1 620 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 SEC14L1Q92503 715 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 ELMO1Q92556 727 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 SLC25A23Q9BV35 468 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 VPS37BQ9H9H4 285 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 FANCEQ9HB96 536 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 ETNK1Q9HBU6 452 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 SYTL2Q9HCH5 934 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 SNX7Q9UNH6 387 aa15.01□□□□□ -0.01
SEC13-210ENST00000428626 PCDHGA9Q9Y5G4 932 aaKnown RBP15.01□□□□□ -0.01
SEC13-210ENST00000428626 LIN7AO14910 233 aaPredicted RBP15□□□□□ -0.01
SEC13-210ENST00000428626 CHRM5P08912 532 aaPredicted RBP15□□□□□ -0.01
SEC13-210ENST00000428626 CBSLP0DN79 551 aa15□□□□□ -0.01
SEC13-210ENST00000428626 ETS1P14921 441 aa15□□□□□ -0.01
SEC13-210ENST00000428626 CBSP35520 551 aa15□□□□□ -0.01
SEC13-210ENST00000428626 VRK3Q8IV63 474 aa15□□□□□ -0.01
SEC13-210ENST00000428626 FAM20CQ8IXL6 584 aa15□□□□□ -0.01
SEC13-210ENST00000428626 C19orf47Q8N9M1 422 aaKnown RBP15□□□□□ -0.01
SEC13-210ENST00000428626 LKAAEAR1Q8TD35 194 aa15□□□□□ -0.01
SEC13-210ENST00000428626 HDAC10Q969S8 669 aa15□□□□□ -0.01
SEC13-210ENST00000428626 NUDT9Q9BW91 350 aa15□□□□□ -0.01
SEC13-210ENST00000428626 SPRTNQ9H040 489 aaPredicted RBP15□□□□□ -0.01
SEC13-210ENST00000428626 ACSS2Q9NR19 701 aa15□□□□□ -0.01
SEC13-210ENST00000428626 IMPACTQ9P2X3 320 aa15□□□□□ -0.01
SEC13-210ENST00000428626 ASF1AQ9Y294 204 aa15□□□□□ -0.01
SEC13-210ENST00000428626 ANKRD12Q6UB98 2062 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 E7EQ34 232 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 LIASO43766 372 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 CNOT3O75175 753 aaKnown RBP14.99□□□□□ -0.01
SEC13-210ENST00000428626 ZNF189O75820 626 aaPredicted RBP14.99□□□□□ -0.01
SEC13-210ENST00000428626 KLF7O75840 302 aaPredicted RBP14.99□□□□□ -0.01
SEC13-210ENST00000428626 SORBS2O94875 1100 aaKnown RBP14.99□□□□□ -0.01
SEC13-210ENST00000428626 TMEM63AO94886 807 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 GOT2P00505 430 aaKnown RBP14.99□□□□□ -0.01
SEC13-210ENST00000428626 PTMAP06454 111 aaKnown RBP14.99□□□□□ -0.01
SEC13-210ENST00000428626 GSTM1P09488 218 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 PGDP52209 483 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 CSE1LP55060 971 aaKnown RBP14.99□□□□□ -0.01
SEC13-210ENST00000428626 GSTM4Q03013 218 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 KIF5AQ12840 1032 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 ATP1A4Q13733 1029 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 NCF4Q15080 339 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 PRR30Q53SZ7 412 aaPredicted RBP14.99□□□□□ -0.01
SEC13-210ENST00000428626 SYCE1Q8N0S2 351 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 Q8NA96 180 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 FDCSPQ8NFU4 85 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 LRRC45Q96CN5 670 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 MENTQ9BUN1 341 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 SERTAD3Q9UJW9 196 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 CDYLQ9Y232 598 aa14.99□□□□□ -0.01
SEC13-210ENST00000428626 TDRKHQ9Y2W6 561 aaKnown RBP14.99□□□□□ -0.01
SEC13-210ENST00000428626 ESPL1Q14674 2120 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 IQCF5A8MTL0 148 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 MASP2O00187 686 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 ZNF185O15231 689 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 PSMD3O43242 534 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 SUN1O94901 812 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 FTH1P02794 183 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 ATXN8OSP0DMR3 200 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 CCR7P32248 378 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 SHMT2P34897 504 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 ACVR1Q04771 509 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 CDH17Q12864 832 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 GRB7Q14451 532 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 KCTD19Q17RG1 926 aaPredicted RBP14.98□□□□□ -0.01
SEC13-210ENST00000428626 TSTD2Q5T7W7 516 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 C1orf189Q5VU69 101 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 LDB1Q86U70 411 aaPredicted RBP14.98□□□□□ -0.01
SEC13-210ENST00000428626 TBC1D21Q8IYX1 336 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 FAM26EQ8N5C1 309 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 LINC01555Q8NAE3 123 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 OR5K2Q8NHB8 316 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 C1orf54Q8WWF1 131 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 GBP5Q96PP8 586 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 PSMG3-AS1Q96PY0 264 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 CASS4Q9NQ75 786 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 LUZP4Q9P127 313 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 CIDEBQ9UHD4 219 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 KLHL20Q9Y2M5 609 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 HIVEP3Q5T1R4 2406 aa14.98□□□□□ -0.01
SEC13-210ENST00000428626 A0A0J9YY10 115 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 A6NL46 340 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 TTLL8A6PVC2 850 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 IFNB1P01574 187 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 GNLYP22749 145 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 RAPSNQ13702 412 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 ZNF449Q6P9G9 518 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 LINC00523Q86TU6 105 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 DNAJC22Q8N4W6 341 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 RBMXL3Q8N7X1 1067 aaKnown RBP14.97□□□□□ -0.01
SEC13-210ENST00000428626 DNAAF3Q8N9W5 541 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 CPT1CQ8TCG5 803 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 TCTN2Q96GX1 697 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 RANBP9Q96S59 729 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 AP1M1Q9BXS5 423 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 MARCH4Q9P2E8 410 aaPredicted RBP14.97□□□□□ -0.01
SEC13-210ENST00000428626 DHCR7Q9UBM7 475 aaKnown RBP14.97□□□□□ -0.01
SEC13-210ENST00000428626 MAP4K5Q9Y4K4 846 aa14.97□□□□□ -0.01
SEC13-210ENST00000428626 HEATR9A2RTY3 570 aa14.96□□□□□ -0.01
SEC13-210ENST00000428626 ERI2A8K979 691 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms