RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TDP1Q9NUW8 608 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 DNAAF2Q9NVR5 837 aaKnown RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 GDAP2Q9NXN4 497 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 CCDC59Q9P031 241 aaKnown RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 NCDNQ9UBB6 729 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 DKKL1Q9UK85 242 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 C15orf41Q9Y2V0 281 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 ASB3Q9Y575 518 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 FKBP7Q9Y680 259 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 DNAJA2O60884 412 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 IL33O95760 270 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 PGRP06401 933 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 MPIP34949 423 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 TXNL4AP83876 142 aaKnown RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 PITPNAQ00169 270 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 E2F2Q14209 437 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 PDK4Q16654 411 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 PTPN20Q4JDL3 420 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 SMARCD3Q6STE5 483 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 ZZZ3Q8IYH5 903 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 NETO2Q8NC67 525 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 OR10H4Q8NGA5 316 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 MCFD2Q8NI22 146 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 KLHL6Q8WZ60 621 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 NDRG1Q92597 394 aaKnown RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 DIRAS2Q96HU8 199 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 EPYCQ99645 322 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 TRMT61BQ9BVS5 477 aaKnown RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 ACSS3Q9H6R3 686 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 TXNRD2Q9NNW7 524 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 AP4B1Q9Y6B7 739 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 TEX13CA0A0J9YWL9 993 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 SCGB2A1O75556 95 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 NADKO95544 446 aaPredicted RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 ZBTB11O95625 1053 aaPredicted RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 TACSTD2P09758 323 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 JMJD7P0C870 316 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 PRPS2P11908 318 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 GDI1P31150 447 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 TAS2R40P59535 323 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 EIF5AP63241 154 aaKnown RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 ARHGAP1Q07960 439 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 KLK6Q92876 244 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 ART4Q93070 314 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 OR2AG1Q9H205 316 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 GBA3Q9H227 469 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 ST6GALNAC4Q9H4F1 302 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 IL36AQ9UHA7 158 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 SNED1Q8TER0 1413 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 TOPAZ1Q8N9V7 1692 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 COL6A1P12109 1028 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 MAP3K8P41279 467 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 HSPA7P48741 367 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 NCBP2P52298 156 aaKnown RBP eCLIP8.79□□□□□ -18e-20■□□□□ 11.1
CTNND1-208ENST00000428599 AAGABQ6PD74 315 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 DNAJB7Q7Z6W7 309 aaPredicted RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 LAPTM4BQ86VI4 370 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 SCGB3A2Q96PL1 93 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 CPXM1Q96SM3 734 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 THUMPD1Q9NXG2 353 aaKnown RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 ITGB1BP2Q9UKP3 347 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 PCDHGA11Q9Y5H2 935 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 UNCXA6NJT0 531 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 NPIPA5E9PKD4 350 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 LINGO3P0C6S8 592 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 PBX3P40426 434 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 NSG1P42857 185 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 CCR8P51685 355 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 PLA2G16P53816 162 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 CRISP3P54108 245 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 FAM189A2Q15884 450 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 CARD16Q5EG05 197 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 SLC9A4Q6AI14 798 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 GDF6Q6KF10 455 aaPredicted RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 SDR16C5Q8N3Y7 309 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 LNX2Q8N448 690 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 NPLOC4Q8TAT6 608 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 NPAS2Q99743 824 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 XPNPEP1Q9NQW7 623 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 RDH8Q9NYR8 311 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 PACSIN3Q9UKS6 424 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 NPIPA1Q9UND3 350 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 PCDHGB2Q9Y5G2 931 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 A0A1W2PQ45 241 aaPredicted RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 A0A1W2PQY0 241 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 MAGEB17A8MXT2 336 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 AGR2O95994 175 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 MT-CYBP00156 380 aaPredicted RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 CSTBP04080 98 aaKnown RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 TPSB2P20231 275 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 DSC2Q02487 901 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 TPSAB1Q15661 275 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 IL23RQ5VWK5 629 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 SLC26A9Q7LBE3 791 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 SLCO6A1Q86UG4 719 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 PDPRQ8NCN5 879 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 AENQ8WTP8 325 aaKnown RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 TCEAL3Q969E4 200 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 SIPA1Q96FS4 1042 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 CSPG4P5Q96PW8 444 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms