RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 INAQ16352 499 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 CARTPTQ16568 116 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 FAM171BQ6P995 826 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 PLD3Q8IV08 490 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 DENND6AQ8IWF6 608 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 ARFGAP1Q8N6T3 406 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 FNDC5Q8NAU1 212 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 CHST14Q8NCH0 376 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 COX4I2Q96KJ9 171 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 OR52B2Q96RD2 323 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 FAM83CQ9BQN1 747 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 SLC25A23Q9BV35 468 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 FBXW2Q9UKT8 454 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 CNTN6Q9UQ52 1028 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 ACACAQ13085 2346 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 MAST2Q6P0Q8 1798 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 GABRDO14764 452 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 MFN2O95140 757 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 TFPTP0C1Z6 253 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 ETV3P41162 512 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 XIAPP98170 497 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 ATP6AP1LQ52LC2 224 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 SAMD4BQ5PRF9 694 aaKnown RBP10.45□□□□□ -0.74
TCOF1-204ENST00000427724 NCBP2-AS2Q69YL0 99 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 PIWIL4Q7Z3Z4 852 aaKnown RBP10.45□□□□□ -0.74
TCOF1-204ENST00000427724 HPS1Q92902 700 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 MR1Q95460 341 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-204ENST00000427724 PIPSLA2A3N6 862 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 NPC1O15118 1278 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 OR1F1O43749 312 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 ZBTB11O95625 1053 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-204ENST00000427724 SRFP11831 508 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 TCEA1P23193 301 aaKnown RBP10.45□□□□□ -0.74
TCOF1-204ENST00000427724 FASP25445 335 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 TNFRSF4P43489 277 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 CLCN4P51793 760 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 SCD5Q86SK9 330 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 MICU2Q8IYU8 434 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 FIBINQ8TAL6 211 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 SUN3Q8TAQ9 357 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 RAB7BQ96AH8 199 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 MOCOSQ96EN8 888 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 JSRP1Q96MG2 331 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-204ENST00000427724 NECAB3Q96P71 396 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-204ENST00000427724 ZSCAN5AQ9BUG6 496 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 CPEB1Q9BZB8 566 aaKnown RBP10.45□□□□□ -0.74
TCOF1-204ENST00000427724 PRRG4Q9BZD6 226 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 DPY30Q9C005 99 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 TMEM245Q9H330 911 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 ABI3Q9P2A4 366 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 BTRCQ9Y297 605 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 NDUFAF1Q9Y375 327 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 DNAJC13O75165 2243 aa10.45□□□□□ -0.74
TCOF1-204ENST00000427724 LINC00854A0A1B0GVQ3 168 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 OR51F1A6NGY5 319 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 SHISA7A6NL88 538 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 TRIM38O00635 465 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 CCNDBP1O95273 360 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 GOT2P00505 430 aaKnown RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 SLC35G6P0C7Q6 338 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 CCNYL3P0C7X3 344 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 MLLT3P42568 568 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 CLDN2P57739 230 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 MRPS21P82921 87 aaKnown RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 ZNHIT3Q15649 155 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 CYP51A1Q16850 503 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 SLC9B2Q86UD5 537 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 SYT12Q8IV01 421 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 TFGQ92734 400 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 MCCC1Q96RQ3 725 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 EGFL7Q9UHF1 273 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 PPIEQ9UNP9 301 aaKnown RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 OR1A2Q9Y585 309 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 PCDHB1Q9Y5F3 818 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 ATG2BQ96BY7 2078 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 A6NCN8 305 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 MATN2O00339 956 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 CLDN4O14493 209 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 NTRK1P04629 796 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 SNRPB2P08579 225 aaKnown RBP10.44□□□□□ -0.74
TCOF1-204ENST00000427724 SERINC3Q13530 473 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 SLC9A4Q6AI14 798 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 TMEM126BQ8IUX1 230 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 UBR7Q8N806 425 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 CDYL2Q8N8U2 506 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 BORCS5Q969J3 196 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 CIB1Q99828 191 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 FAIM2Q9BWQ8 316 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 DGCR6LQ9BY27 220 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 ZC4H2Q9NQZ6 224 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 HRASLS2Q9NWW9 162 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 DOCK3Q8IZD9 2030 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 C9JVG2 144 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 FAM72CH0Y354 149 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 STX16-NPEPL1H3BU86 382 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 SLC7A2P52569 658 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 FAM72AQ5TYM5 149 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 FAM72DQ6L9T8 149 aa10.44□□□□□ -0.74
TCOF1-204ENST00000427724 ARHGAP36Q6ZRI8 547 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms