RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CRADDP78560 199 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 TUBB3Q13509 450 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 KCNAB1Q14722 419 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 PCID2Q5JVF3 399 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 PACS1Q6VY07 963 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 PPP1R3BQ86XI6 285 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 ESX1Q8N693 406 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 PRELID2Q8N945 189 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 OR4E2Q8NGC2 313 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 ANP32BQ92688 251 aaKnown RBP12.35□□□□□ -0.43
SGCE-203ENST00000425444 TFGQ92734 400 aaPredicted RBP12.35□□□□□ -0.43
SGCE-203ENST00000425444 PEX13Q92968 403 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 STAMBPL1Q96FJ0 436 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 TCTN2Q96GX1 697 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 PBKQ96KB5 322 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 TSSK1BQ9BXA7 367 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 IL22Q9GZX6 179 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 SRMSQ9H3Y6 488 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 PDE7BQ9NP56 450 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 CHRAC1Q9NRG0 131 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 CATSPERZQ9NTU4 200 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 SOHLH2Q9NX45 425 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 BFARQ9NZS9 450 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 LNPEPQ9UIQ6 1025 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 ERRFI1Q9UJM3 462 aaPredicted RBP12.35□□□□□ -0.43
SGCE-203ENST00000425444 TLK1Q9UKI8 766 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 MAP4K5Q9Y4K4 846 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 TMEM184BQ9Y519 407 aaPredicted RBP12.35□□□□□ -0.43
SGCE-203ENST00000425444 PCDHB3Q9Y5E6 796 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 POLEQ07864 2286 aa12.35□□□□□ -0.43
SGCE-203ENST00000425444 MAP1AP78559 2803 aaPredicted RBP12.34□□□□□ -0.43
SGCE-203ENST00000425444 TCP11X1B4DZS4 312 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 MATN2O00339 956 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 OR1I1O60431 355 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 KIAA0754O94854 1291 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 DLGAP3O95886 979 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 EBLN1P0CF75 366 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 ZNF28P17035 718 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 TPSB2P20231 275 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 CDH3P22223 829 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 CSE1LP55060 971 aaKnown RBP12.34□□□□□ -0.43
SGCE-203ENST00000425444 ACY1Q03154 408 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 ACVR1Q04771 509 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 ABHD18Q0P651 414 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 GPS1Q13098 491 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 PRKG2Q13237 762 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 TPSAB1Q15661 275 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 KCTD19Q17RG1 926 aaPredicted RBP12.34□□□□□ -0.43
SGCE-203ENST00000425444 ZNF658BQ4V348 819 aaPredicted RBP12.34□□□□□ -0.43
SGCE-203ENST00000425444 CRTC2Q53ET0 693 aaPredicted RBP12.34□□□□□ -0.43
SGCE-203ENST00000425444 C6orf15Q6UXA7 325 aaPredicted RBP12.34□□□□□ -0.43
SGCE-203ENST00000425444 NAPRTQ6XQN6 538 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 ZNF534Q76KX8 674 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 TIPARPQ7Z3E1 657 aaKnown RBP12.34□□□□□ -0.43
SGCE-203ENST00000425444 KMT5CQ86Y97 462 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 PHC3Q8NDX5 983 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 OR52E1Q8NGJ3 308 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 MARVELD3Q96A59 401 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 MS4A14Q96JA4 679 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 SLC41A2Q96JW4 573 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 NAP1L3Q99457 506 aaPredicted RBP12.34□□□□□ -0.43
SGCE-203ENST00000425444 AP1M1Q9BXS5 423 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 MVB12BQ9H7P6 319 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 SEMA5BQ9P283 1151 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 RARRES3Q9UL19 164 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 ASF1AQ9Y294 204 aa12.34□□□□□ -0.43
SGCE-203ENST00000425444 MRPS18BQ9Y676 258 aaKnown RBP12.34□□□□□ -0.43
SGCE-203ENST00000425444 PGRMC1O00264 195 aaKnown RBP12.33□□□□□ -0.44
SGCE-203ENST00000425444 KIF5CO60282 957 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 SPAG6O75602 509 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 ZBTB11O95625 1053 aaPredicted RBP12.33□□□□□ -0.44
SGCE-203ENST00000425444 PDGFAP04085 211 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 FGF5P12034 268 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 PRF1P14222 555 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 MGAT1P26572 445 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 NPY2RP49146 381 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 TTPAP49638 278 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 KPNA2P52292 529 aaKnown RBP12.33□□□□□ -0.44
SGCE-203ENST00000425444 HSD11B2P80365 405 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 SARNPP82979 210 aaKnown RBP12.33□□□□□ -0.44
SGCE-203ENST00000425444 CDK16Q00536 496 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 PLOD1Q02809 727 aaPredicted RBP12.33□□□□□ -0.44
SGCE-203ENST00000425444 MAP7Q14244 749 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 SEMA3AQ14563 771 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.33□□□□□ -0.44
SGCE-203ENST00000425444 TMTC4Q5T4D3 741 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 LRRC8BQ6P9F7 803 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 HOOK3Q86VS8 718 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 SLC34A3Q8N130 599 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 SLC35F6Q8N357 371 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 RASGEF1CQ8N431 466 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 GALNT6Q8NCL4 622 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 MAGOHBQ96A72 148 aaKnown RBP12.33□□□□□ -0.44
SGCE-203ENST00000425444 SPRY4Q9C004 299 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 XKR8Q9H6D3 395 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 FANCEQ9HB96 536 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 FGF21Q9NSA1 209 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 SYBUQ9NX95 663 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 MAP10Q9P2G4 905 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms