RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 LMX1AQ8TE12 382 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 ANKRD49Q8WVL7 239 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 KCNJ9Q92806 393 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 PTCD3Q96EY7 689 aaKnown RBP15.3■□□□□ 0.04
SHOX2-202ENST00000425436 BOCQ9BWV1 1114 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 TMEM168Q9H0V1 697 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 COG4Q9H9E3 785 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 DNAAF2Q9NVR5 837 aaKnown RBP15.3■□□□□ 0.04
SHOX2-202ENST00000425436 SMOXQ9NWM0 555 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 APOBEC3BQ9UH17 382 aaKnown RBP15.3■□□□□ 0.04
SHOX2-202ENST00000425436 DGKBQ9Y6T7 804 aa15.3■□□□□ 0.04
SHOX2-202ENST00000425436 ASCC3Q8N3C0 2202 aaKnown RBP15.3■□□□□ 0.04
SHOX2-202ENST00000425436 TRBV5-4A0A0C4DH59 114 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 TRPC5OSA6NMA1 111 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 CAPN14A8MX76 684 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 NUAK1O60285 661 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 MGRN1O60291 552 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 FOXD2O60548 495 aaPredicted RBP15.29■□□□□ 0.04
SHOX2-202ENST00000425436 PIAS2O75928 621 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 CBX6O95503 412 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 CTSEP14091 401 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 MSH3P20585 1137 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 RPS3P23396 243 aaKnown RBP eCLIP15.29■□□□□ 0.04
SHOX2-202ENST00000425436 DGKAP23743 735 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 ACRV1P26436 265 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 CCT8P50990 548 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 HNRNPKP61978 463 aaKnown RBP eCLIP15.29■□□□□ 0.04
SHOX2-202ENST00000425436 ELF3P78545 371 aaPredicted RBP15.29■□□□□ 0.04
SHOX2-202ENST00000425436 CRTC3Q6UUV7 619 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 TMEM207Q6UWW9 146 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 ACAD11Q709F0 780 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 ARHGAP24Q8N264 748 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 SPATA6LQ8N4H0 392 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 CCNYL1Q8N7R7 359 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 ZNF781Q8N8C0 355 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 DDHD1Q8NEL9 900 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 SAP25Q8TEE9 199 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 KIAA1191Q96A73 305 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 ULK4Q96C45 1275 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 SLC7A6OSQ96CW6 309 aaPredicted RBP15.29■□□□□ 0.04
SHOX2-202ENST00000425436 L3HYPDHQ96EM0 354 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 SGF29Q96ES7 293 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 SCARF2Q96GP6 870 aaPredicted RBP15.29■□□□□ 0.04
SHOX2-202ENST00000425436 BTBD10Q9BSF8 475 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 CCDC28BQ9BUN5 200 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 LRRC61Q9BV99 259 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 CLPBQ9H078 707 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.29■□□□□ 0.04
SHOX2-202ENST00000425436 TAGLN3Q9UI15 199 aa15.29■□□□□ 0.04
SHOX2-202ENST00000425436 GOLGA8QA0A0J9YX86 632 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 GOLGA8OA6NCC3 632 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 OR2AG2A6NM03 316 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 A8MT66 165 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 GOLGA8NF8WBI6 632 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 H3BM21 787 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 PRMT5O14744 637 aaPredicted RBP15.28■□□□□ 0.04
SHOX2-202ENST00000425436 SLC22A2O15244 555 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 DIAPH2O60879 1101 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 EPHA8P29322 1005 aaPredicted RBP15.28■□□□□ 0.04
SHOX2-202ENST00000425436 ADSLP30566 484 aaPredicted RBP15.28■□□□□ 0.04
SHOX2-202ENST00000425436 ARRB2P32121 409 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 BLKP51451 505 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 B4GALNT1Q00973 533 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 TIAL1Q01085 375 aaKnown RBP eCLIP15.28■□□□□ 0.04
SHOX2-202ENST00000425436 PLA2G4EQ3MJ16 856 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 PYCR3Q53H96 274 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 CHST15Q7LFX5 561 aaPredicted RBP15.28■□□□□ 0.04
SHOX2-202ENST00000425436 GALNT13Q8IUC8 556 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 ZNF548Q8NEK5 533 aaPredicted RBP15.28■□□□□ 0.04
SHOX2-202ENST00000425436 BIRC8Q96P09 236 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 COPS8Q99627 209 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 EBF4Q9BQW3 602 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 CCDC106Q9BWC9 280 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 MMADHCQ9H3L0 296 aaPredicted RBP15.28■□□□□ 0.04
SHOX2-202ENST00000425436 ALG9Q9H6U8 611 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 ARL8BQ9NVJ2 186 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 ZDHHC3Q9NYG2 299 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 TRMT6Q9UJA5 497 aaKnown RBP15.28■□□□□ 0.04
SHOX2-202ENST00000425436 ST14Q9Y5Y6 855 aa15.28■□□□□ 0.04
SHOX2-202ENST00000425436 GYG2O15488 501 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 FFAR2O15552 330 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 AQP9O43315 295 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 GRID2O43424 1007 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 VEGFDO43915 354 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 OR1I1O60431 355 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 PRDX6P30041 224 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 CTSCP53634 463 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 ALDH18A1P54886 795 aaKnown RBP15.27■□□□□ 0.04
SHOX2-202ENST00000425436 IL2P60568 153 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 KCNJ2P63252 427 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 TUBB3Q13509 450 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 GTF2H3Q13889 308 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 TMEM220Q6QAJ8 160 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 ZNF547Q8IVP9 402 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 PARP9Q8IXQ6 854 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 CLDN19Q8N6F1 224 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 BEND7Q8N7W2 519 aaPredicted RBP15.27■□□□□ 0.04
SHOX2-202ENST00000425436 CMTM5Q96DZ9 223 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 DCUN1D1Q96GG9 259 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms