RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 R3HDMLQ9H3Y0 253 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 DIABLOQ9NR28 239 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 KLK14Q9P0G3 267 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 OR12D3Q9UGF7 316 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 ZNF225Q9UK10 706 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 ZNF214Q9UL59 606 aaPredicted RBP11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 ABCG2Q9UNQ0 655 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 TPRKBQ9Y3C4 175 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 PARP14Q460N5 1801 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 ZNF487B1APH4 448 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 FAM25AB3EWG3 89 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 FAM25CB3EWG5 89 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 FAM25GB3EWG6 89 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 PCDHGA12O60330 932 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 MTHFD2P13995 350 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 SDHBP21912 280 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 DNAJB1P25685 340 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 PTGS2P35354 604 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 ADRA1BP35368 520 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 DAPP51397 102 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 FAM189BP81408 668 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 MXD1Q05195 221 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 TMEM132BQ14DG7 1078 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 C18orf21Q32NC0 220 aaPredicted RBP11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 DPY19L3Q6ZPD9 716 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 PROSER1Q86XN7 944 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 COPS5Q92905 334 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 RHBDF1Q96CC6 855 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 HDHD5Q9BXW7 423 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 CYP3A43Q9HB55 503 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 EXOSC4Q9NPD3 245 aaKnown RBP11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 RGS18Q9NS28 235 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 ADAMTS5Q9UNA0 930 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 DOCK1Q14185 1865 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 YJEFN3A6XGL0 299 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 MYL3P08590 195 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 PSKH1P11801 424 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 DDOSTP39656 456 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 ATP4BP51164 291 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 RBP5P82980 135 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 SMARCB1Q12824 385 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 TARDBPQ13148 414 aaKnown RBP eCLIP11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 GALNT3Q14435 633 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 PAFAH1B3Q15102 231 aaKnown RBP11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 DPP9Q86TI2 863 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 APOBEC3FQ8IUX4 373 aaKnown RBP11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC22A9Q8IVM8 553 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 OR4M1Q8NGD0 313 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 OR52B6Q8NGF0 335 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 CCDC126Q96EE4 140 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 ZFP14Q9HCL3 533 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 EVA1BQ9NVM1 165 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 MAGEL2Q9UJ55 1249 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 GJD2Q9UKL4 321 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 CDH9Q9ULB4 789 aa11.07□□□□□ -0.64
SEC61A1-202ENST00000424880 PHIPQ8WWQ0 1821 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 TRAV19A0A0A6YYK7 116 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 UBA6A0AVT1 1052 aaPredicted RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 OR2A25A4D2G3 310 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 SNTNA6NMZ2 147 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 EEDO75530 441 aaKnown RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 OR4F21O95013 312 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 TP53P04637 393 aaPredicted RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 CCNYL3P0C7X3 344 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 ZNF250P15622 560 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 ARF4P18085 180 aaPredicted RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 GGT1P19440 569 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 HTR6P50406 440 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 CLCN7P51798 805 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 KPNA2P52292 529 aaKnown RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 MAP3K7CLP57077 242 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 EEFSECP57772 596 aaKnown RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 MBTD1Q05BQ5 628 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 GPR50Q13585 617 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 KRR1Q13601 381 aaKnown RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 ACOX1Q15067 660 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 PLEKHG6Q3KR16 790 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 SYVN1Q86TM6 617 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 RAB43Q86YS6 212 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 HIPK1Q86Z02 1210 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 AMER2Q8N7J2 671 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 OR2A14Q96R47 310 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 GFM1Q96RP9 751 aaKnown RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 NIFKQ9BYG3 293 aaKnown RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 DUSP21Q9H596 190 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 SMPD4Q9NXE4 827 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 GPR83Q9NYM4 423 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 TMPRSS11EQ9UL52 423 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 PCDHGB1Q9Y5G3 927 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 COL11A1P12107 1806 aaPredicted RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 TEX51A0A1B0GUA7 166 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 CYP2A6P11509 494 aaPredicted RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 IL32P24001 234 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 SCNN1GP51170 649 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 UBE3AQ05086 875 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 ZNF267Q14586 743 aaPredicted RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 STK11Q15831 433 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 SGO1Q5FBB7 561 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 VN1R5Q7Z5H4 357 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms