RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 KERAO60938 352 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 MYL2P10916 166 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 ENGP17813 658 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 NAGLUP54802 743 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 DUOXA1Q1HG43 343 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 CAPRIN2Q6IMN6 1127 aaKnown RBP13.08□□□□□ -0.32
PRPF39-202ENST00000424478 SUMF1Q8NBK3 374 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 ZDHHC1Q8WTX9 485 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 THOC1Q96FV9 657 aaKnown RBP13.08□□□□□ -0.32
PRPF39-202ENST00000424478 GSDMCQ9BYG8 508 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 C20orf27Q9GZN8 174 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 TFB2MQ9H5Q4 396 aaKnown RBP13.08□□□□□ -0.32
PRPF39-202ENST00000424478 PCDH15Q96QU1 1955 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 ZWINTO95229 277 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 SLC34A2O95436 690 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 GSTM1P09488 218 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 COL6A2P12110 1019 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 F3P13726 295 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 ENO3P13929 434 aaPredicted RBP13.08□□□□□ -0.32
PRPF39-202ENST00000424478 BLKP51451 505 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 ATP6V0D1P61421 351 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 HNRNPKP61978 463 aaKnown RBP eCLIP13.08□□□□□ -0.32
PRPF39-202ENST00000424478 GSTM4Q03013 218 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 DMPKQ09013 629 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 CHI3L2Q15782 390 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 TSNAXIP1Q2TAA8 658 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 MED8Q96G25 268 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 SUSD2Q9UGT4 822 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 UNC13CQ8NB66 2214 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 GFYI3L273 518 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 TAPBPO15533 448 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 PSIP1O75475 530 aaKnown RBP13.08□□□□□ -0.32
PRPF39-202ENST00000424478 CBSLP0DN79 551 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 CBSP35520 551 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 GRB7Q14451 532 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 PDLIM5Q96HC4 596 aaKnown RBP13.08□□□□□ -0.32
PRPF39-202ENST00000424478 PARVBQ9HBI1 364 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 SLCO1B3Q9NPD5 702 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 MKS1Q9NXB0 559 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 ACSL5Q9ULC5 683 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 F8W8V4 182 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 ITM2AO43736 263 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 BPGMP07738 259 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 GSTA1P08263 222 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 GIMD1P0DJR0 217 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 MAP4P27816 1152 aaKnown RBP13.07□□□□□ -0.32
PRPF39-202ENST00000424478 PSMB5P28074 263 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 LRP8Q14114 963 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 FAM47EQ6ZV65 393 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 DCP2Q8IU60 420 aaKnown RBP13.07□□□□□ -0.32
PRPF39-202ENST00000424478 NUDCD3Q8IVD9 361 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 FBXO39Q8N4B4 442 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 SKA1Q96BD8 255 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 FOPNLQ96NB1 174 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 SLC12A9Q9BXP2 914 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 BTBD3Q9Y2F9 522 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 DNMT3AQ9Y6K1 912 aaPredicted RBP13.07□□□□□ -0.32
PRPF39-202ENST00000424478 FAM186AA6NE01 2351 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 ARHGAP33O14559 1287 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 TOR1BO14657 336 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 RBP1P09455 135 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 MPC1LP0DKB6 136 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 EEF1DP29692 281 aaKnown RBP13.07□□□□□ -0.32
PRPF39-202ENST00000424478 IYDQ6PHW0 289 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 ADAMTSL2Q86TH1 951 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 MINDY1Q8N5J2 469 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 OR4E2Q8NGC2 313 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 CXorf40BQ96DE9 158 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 TMEM79Q9BSE2 394 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 SSU72Q9NP77 194 aaKnown RBP13.07□□□□□ -0.32
PRPF39-202ENST00000424478 SPASTQ9UBP0 616 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 SLC6A14Q9UN76 642 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 OARD1Q9Y530 152 aa13.07□□□□□ -0.32
PRPF39-202ENST00000424478 PRR5-ARHGAP8B1AHC4 643 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 TRIM38O00635 465 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 TM9SF1O15321 606 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 CATP04040 527 aaKnown RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 CHRNGP07510 517 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 DHRS4L1P0CG22 281 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 FGF3P11487 239 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 MTHFD1P11586 935 aaKnown RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 SLC26A3P40879 764 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 HALP42357 657 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 ARRB1P49407 418 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 PPM1FP49593 454 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 GPR18Q14330 331 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 ELOCQ15369 112 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 CCDC153Q494R4 210 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 ZYG11AQ6WRX3 759 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 KYQ8NBH2 561 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 OR52E1Q8NGJ3 308 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 CDK15Q96Q40 435 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 TBC1D10AQ9BXI6 508 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 WWOXQ9NZC7 414 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 SH2B3Q9UQQ2 575 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 CNOT1A5YKK6 2376 aaKnown RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 PCM1Q15154 2024 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 PPM1DO15297 605 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 GDF9O60383 454 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 CCNT2O60583 730 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms