RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 C1GALT1Q9NS00 363 aa21.25■□□□□ 0.99
TRAF4-204ENST00000422344 GOLGA8KD6RF30 607 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 GOLGA8TH3BQL2 631 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 KPNA5O15131 536 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 ZNF28P17035 718 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 WT1P19544 449 aaPredicted RBP21.24■□□□□ 0.99
TRAF4-204ENST00000422344 RPS3P23396 243 aaKnown RBP eCLIP21.24■□□□□ 0.99
TRAF4-204ENST00000422344 ARNTP27540 789 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 PRDX3P30048 256 aaKnown RBP21.24■□□□□ 0.99
TRAF4-204ENST00000422344 PPIL6Q8IXY8 311 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 UNC5BQ8IZJ1 945 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 GALNT6Q8NCL4 622 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 ZNF669Q96BR6 464 aaPredicted RBP21.24■□□□□ 0.99
TRAF4-204ENST00000422344 CAPZA3Q96KX2 299 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 SERPINB12Q96P63 405 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 TCF12Q99081 682 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 NAPGQ99747 312 aaPredicted RBP21.24■□□□□ 0.99
TRAF4-204ENST00000422344 DDX47Q9H0S4 455 aaKnown RBP21.24■□□□□ 0.99
TRAF4-204ENST00000422344 P2RY12Q9H244 342 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 FANCEQ9HB96 536 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 ASIC3Q9UHC3 531 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 ICKQ9UPZ9 632 aa21.24■□□□□ 0.99
TRAF4-204ENST00000422344 FAM237BA0A1B0GVD1 139 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 PIPSLA2A3N6 862 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 SLC9B1P1A6NJY1 282 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 ZNF891A8MT65 544 aaPredicted RBP21.23■□□□□ 0.99
TRAF4-204ENST00000422344 TERTO14746 1132 aaKnown RBP21.23■□□□□ 0.99
TRAF4-204ENST00000422344 MT-ND3P03897 115 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 CCNYL3P0C7X3 344 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 AOAHP28039 575 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 STAT5AP42229 794 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 TUBB4BP68371 445 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 CYP4F2P78329 520 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 TUBB2AQ13885 445 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 DHX34Q14147 1143 aaKnown RBP21.23■□□□□ 0.99
TRAF4-204ENST00000422344 TBR1Q16650 682 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 ATG14Q6ZNE5 492 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 OTOAQ7RTW8 1153 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 CFAP61Q8NHU2 1237 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 PPM1MQ96MI6 270 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 FCRL4Q96PJ5 515 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 TUBB2BQ9BVA1 445 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 ACTR10Q9NZ32 417 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 PYCARDQ9ULZ3 195 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 BTRCQ9Y297 605 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 VPS9D1Q9Y2B5 631 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 MAD1L1Q9Y6D9 718 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 RPS6KL1Q9Y6S9 549 aa21.23■□□□□ 0.99
TRAF4-204ENST00000422344 LOC101059948A0A1B0GTJ6 334 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 H3BMM5 538 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 GPC4O75487 556 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 OGNP20774 298 aaKnown RBP21.22■□□□□ 0.99
TRAF4-204ENST00000422344 ABRQ12979 859 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 THOC5Q13769 683 aaKnown RBP21.22■□□□□ 0.99
TRAF4-204ENST00000422344 GPR19Q15760 415 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 TYSND1Q2T9J0 566 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 ANKRD20A4Q4UJ75 823 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 NEPROQ6NW34 567 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 UNC5AQ6ZN44 842 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 ADGRF3Q8IZF5 1079 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 NAT8LQ8N9F0 302 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 OR8K5Q8NH50 307 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 SKA2Q8WVK7 121 aaPredicted RBP21.22■□□□□ 0.99
TRAF4-204ENST00000422344 NRTNQ99748 197 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 OR6C2Q9NZP2 312 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 PLAGL1Q9UM63 463 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 SAR1BQ9Y6B6 198 aa21.22■□□□□ 0.99
TRAF4-204ENST00000422344 CTAGE9A4FU28 777 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 SUV39H1O43463 412 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 SFTPCP11686 197 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 FMO4P31512 558 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 PAPD7Q5XG87 772 aaKnown RBP21.21■□□□□ 0.99
TRAF4-204ENST00000422344 PWWP2BQ6NUJ5 590 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 TTC23LQ6PF05 361 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 UNC5DQ6UXZ4 953 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 PCGF5Q86SE9 256 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 TMEM126BQ8IUX1 230 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 VRK3Q8IV63 474 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 LPGAT1Q92604 370 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 SLC45A3Q96JT2 553 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 TRIM56Q9BRZ2 755 aaKnown RBP21.21■□□□□ 0.99
TRAF4-204ENST00000422344 SLC12A9Q9BXP2 914 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 PITPNM3Q9BZ71 974 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 KCND1Q9NSA2 647 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 CDYLQ9Y232 598 aa21.21■□□□□ 0.99
TRAF4-204ENST00000422344 FLNCQ14315 2725 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 SCRG1O75711 98 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 SLCO2B1O94956 709 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 TIAF1O95411 115 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 ESR1P03372 595 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 CHRM5P08912 532 aaPredicted RBP21.2■□□□□ 0.98
TRAF4-204ENST00000422344 ST6GAL1P15907 406 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 DLSTP36957 453 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 MC1RQ01726 317 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 PTK6Q13882 451 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 RNASEH2BQ5TBB1 312 aaKnown RBP21.2■□□□□ 0.98
TRAF4-204ENST00000422344 ZNF470Q6ECI4 717 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 SPESP1Q6UW49 350 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 DCUN1D3Q8IWE4 304 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 RUNDC3BQ96NL0 473 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms