RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 PLEKHS1Q5SXH7 462 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 IZUMO3Q5VZ72 239 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 C16orf46Q6P387 395 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 DCUN1D3Q8IWE4 304 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 ADGRF3Q8IZF5 1079 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 UNC5BQ8IZJ1 945 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 RASGEF1CQ8N431 466 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 OTUD6BQ8N6M0 293 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 EXD3Q8N9H8 876 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 C9orf43Q8TAL5 461 aaPredicted RBP8.38□□□□□ -1.07
MDC1-204ENST00000422266 CALML6Q8TD86 181 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 ACTRT1Q8TDG2 376 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 RAD51AP1Q96B01 352 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 CLIP3Q96DZ5 547 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 IP6K3Q96PC2 410 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 DHRS4Q9BTZ2 278 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 AP1M1Q9BXS5 423 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 TWSG1Q9GZX9 223 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 CCDC68Q9H2F9 335 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 KCNF1Q9H3M0 494 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 TREX1Q9NSU2 369 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 ANAPC2Q9UJX6 822 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 SLC39A10Q9ULF5 831 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 SOX13Q9UN79 622 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 SRPK3Q9UPE1 567 aa8.38□□□□□ -1.07
MDC1-204ENST00000422266 TDRKHQ9Y2W6 561 aaKnown RBP8.38□□□□□ -1.07
MDC1-204ENST00000422266 SPTA1P02549 2419 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 OR51F1A6NGY5 319 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 SDR42E2A6NKP2 422 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 ZNF839A8K0R7 811 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 TMEM150CB9EJG8 249 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 MEN1O00255 615 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 BTN3A3O00478 584 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 NKX2-8O15522 239 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 SLC28A2O43868 658 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 OR1I1O60431 355 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 GPC4O75487 556 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 IGHEP01854 428 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 KRT14P02533 472 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 NTRK1P04629 796 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 CHRM5P08912 532 aaPredicted RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 ZSCAN5DPP0CG00 497 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 PRSS56P0CW18 603 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 PRKAR1AP10644 381 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 PIM1P11309 404 aaPredicted RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 ETS1P14921 441 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 ZNF28P17035 718 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 TCP1P17987 556 aaKnown RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 OGNP20774 298 aaKnown RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 AOAHP28039 575 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 ATP5DP30049 168 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 CCR7P32248 378 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 HSD17B2P37059 387 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 GRIA1P42261 906 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 PPP1CAP62136 330 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 GPS1Q13098 491 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 ERV3-1Q14264 604 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 KCNAB1Q14722 419 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 BRD3Q15059 726 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 CYP1B1Q16678 543 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 KYNUQ16719 465 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 UGT8Q16880 541 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 DEFB109BQ30KR1 87 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 TTLL9Q3SXZ7 439 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 ZC3H12BQ5HYM0 836 aaKnown RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 KIAA0930Q6ICG6 404 aaPredicted RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 CASC4Q6P4E1 433 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 TLDC1Q6P9B6 456 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 CCDC137Q6PK04 289 aaKnown RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 ZNF517Q6ZMY9 492 aaPredicted RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 UNC5AQ6ZN44 842 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 ZNF534Q76KX8 674 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 PRICKLE2Q7Z3G6 844 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 PCGF5Q86SE9 256 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 APLFQ8IW19 511 aaPredicted RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 PRELID2Q8N945 189 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 C19orf47Q8N9M1 422 aaKnown RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 MCUQ8NE86 351 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 OR5AR1Q8NGP9 310 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 PROKR1Q8TCW9 393 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 DLG3Q92796 817 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 MR1Q95460 341 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 ZNF778Q96MU6 729 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 RUNDC3BQ96NL0 473 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 TRAPPC9Q96Q05 1148 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 NLNQ9BYT8 704 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 ACTR5Q9H9F9 607 aaPredicted RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 INTS10Q9NVR2 710 aaKnown RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 UTP6Q9NYH9 597 aaKnown RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 SLC2A6Q9UGQ3 507 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 IL17BQ9UHF5 180 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 FARSAQ9Y285 508 aaKnown RBP8.37□□□□□ -1.07
MDC1-204ENST00000422266 MAN2B2Q9Y2E5 1009 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 COMMD10Q9Y6G5 202 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 PRSS21Q9Y6M0 314 aa8.37□□□□□ -1.07
MDC1-204ENST00000422266 FAM237BA0A1B0GVD1 139 aa8.36□□□□□ -1.07
MDC1-204ENST00000422266 ISM1B1AKI9 464 aa8.36□□□□□ -1.07
MDC1-204ENST00000422266 BHMG1C9JSJ3 638 aaPredicted RBP8.36□□□□□ -1.07
MDC1-204ENST00000422266 E5RI56 91 aa8.36□□□□□ -1.07
MDC1-204ENST00000422266 SMAPO00193 183 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms