RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 KBTBD12Q3ZCT8 623 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 PAQR3Q6TCH7 311 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 ZC3HC1Q86WB0 502 aaKnown RBP15.3■□□□□ 0.04
BRAT1-202ENST00000421712 SPNS2Q8IVW8 549 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 RAB42Q8N4Z0 105 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 GIMAP7Q8NHV1 300 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 MDM1Q8TC05 714 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 CD200R1Q8TD46 325 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 NRTNQ99748 197 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 CPNE1Q99829 537 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 NINJ2Q9NZG7 142 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 EPHA6Q9UF33 1036 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 ICKQ9UPZ9 632 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 MED16Q9Y2X0 877 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 MN1Q10571 1320 aaPredicted RBP15.29■□□□□ 0.04
BRAT1-202ENST00000421712 FAM95CA0A1B0GW59 222 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 EFCAB7A8K855 629 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 BTN3A1O00481 513 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 KIF1CO43896 1103 aaKnown RBP15.29■□□□□ 0.04
BRAT1-202ENST00000421712 BRINP1O60477 761 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 C1orf105O95561 183 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 ACSL3O95573 720 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 C9P02748 559 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 CATP04040 527 aaKnown RBP15.29■□□□□ 0.04
BRAT1-202ENST00000421712 MPC1LP0DKB6 136 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 ENO3P13929 434 aaPredicted RBP15.29■□□□□ 0.04
BRAT1-202ENST00000421712 MAP4P27816 1152 aaKnown RBP15.29■□□□□ 0.04
BRAT1-202ENST00000421712 GP5P40197 560 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 CCNFP41002 786 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 ARL4DP49703 201 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 MAPK10P53779 464 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 PPP1CAP62136 330 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 GBX1Q14549 363 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 SLMAPQ14BN4 828 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 NEK10Q6ZWH5 1172 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 LSMEM2Q8N112 164 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 C2orf73Q8N5S3 287 aaPredicted RBP15.29■□□□□ 0.04
BRAT1-202ENST00000421712 RAD51AP1Q96B01 352 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 MRRFQ96E11 262 aaKnown RBP15.29■□□□□ 0.04
BRAT1-202ENST00000421712 RAB33BQ9H082 229 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 CDC42EP4Q9H3Q1 356 aaKnown RBP15.29■□□□□ 0.04
BRAT1-202ENST00000421712 RHOJQ9H4E5 214 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 PDP2Q9P2J9 529 aa15.29■□□□□ 0.04
BRAT1-202ENST00000421712 COL27A1Q8IZC6 1860 aaPredicted RBP15.29■□□□□ 0.04
BRAT1-202ENST00000421712 A0A1W2PNU3 283 aaPredicted RBP15.28■□□□□ 0.04
BRAT1-202ENST00000421712 PIPSLA2A3N6 862 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 PMS2P1A4D2B8 440 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 C2orf74A8MZ97 194 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 ISM1B1AKI9 464 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 MATN2O00339 956 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 BTN3A3O00478 584 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 ZBTB14O43829 449 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 SLU7O95391 586 aaKnown RBP15.28■□□□□ 0.04
BRAT1-202ENST00000421712 MATN4O95460 622 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 SYF2O95926 243 aaKnown RBP15.28■□□□□ 0.04
BRAT1-202ENST00000421712 CCL4P13236 92 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 ITIH1P19827 911 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 CDH3P22223 829 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 ECHS1P30084 290 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 IL2P60568 153 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 ILF2Q12905 390 aaKnown RBP15.28■□□□□ 0.04
BRAT1-202ENST00000421712 UAP1Q16222 522 aaPredicted RBP15.28■□□□□ 0.04
BRAT1-202ENST00000421712 ARHGAP22Q7Z5H3 698 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 RELL1Q8IUW5 271 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 MYO1HQ8N1T3 1032 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 EEF1AKMT1Q8WVE0 214 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 LINGO1Q96FE5 620 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 VPS39Q96JC1 886 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 IL17FQ96PD4 163 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 MAP3K3Q99759 626 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 OLFM1Q99784 485 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 ACTR10Q9NZ32 417 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 OR6C2Q9NZP2 312 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 LNPEPQ9UIQ6 1025 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 PCDHGA8Q9Y5G5 932 aa15.28■□□□□ 0.04
BRAT1-202ENST00000421712 MAP3K7O43318 606 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 CHRM5P08912 532 aaPredicted RBP15.27■□□□□ 0.04
BRAT1-202ENST00000421712 FDXRP22570 491 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 SPRP35270 261 aaPredicted RBP15.27■□□□□ 0.04
BRAT1-202ENST00000421712 RAB28P51157 221 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 KPNA2P52292 529 aaKnown RBP15.27■□□□□ 0.04
BRAT1-202ENST00000421712 PGGT1BP53609 377 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 TIAL1Q01085 375 aaKnown RBP eCLIP15.27■□□□□ 0.04
BRAT1-202ENST00000421712 USP10Q14694 798 aaKnown RBP15.27■□□□□ 0.04
BRAT1-202ENST00000421712 EFTUD2Q15029 972 aaKnown RBP eCLIP15.27■□□□□ 0.043e-6■■■□□ 19.2
BRAT1-202ENST00000421712 GRTP1Q5TC63 336 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 LRRC8EQ6NSJ5 796 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 UBE2R2Q712K3 238 aaPredicted RBP15.27■□□□□ 0.04
BRAT1-202ENST00000421712 PIWIL4Q7Z3Z4 852 aaKnown RBP15.27■□□□□ 0.04
BRAT1-202ENST00000421712 TAX1BP1Q86VP1 789 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 ADGRF3Q8IZF5 1079 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 UBXN4Q92575 508 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 SLC46A1Q96NT5 459 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 CNTNAP3BQ96NU0 1288 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 CYTH2Q99418 400 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 CD180Q99467 661 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 RBBP8Q99708 897 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 RAB11FIP5Q9BXF6 653 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 CNTNAP3Q9BZ76 1288 aa15.27■□□□□ 0.04
BRAT1-202ENST00000421712 OCIAD1Q9NX40 245 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms