RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 LRRTM2O43300 516 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 ANXA9O76027 345 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 CRTAMO95727 393 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 CHRM5P08912 532 aaPredicted RBP7.81□□□□□ -1.16
VIM-202ENST00000421459 MSL3P1P0C860 447 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 RALBP11234 206 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 ITGALP20701 1170 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 ALAS2P22557 587 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 MCM3P25205 808 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 ACRV1P26436 265 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 FOLR3P41439 243 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 MAGEA1P43355 309 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 CSE1LP55060 971 aaKnown RBP7.81□□□□□ -1.16
VIM-202ENST00000421459 DCDP81605 110 aaKnown RBP7.81□□□□□ -1.16
VIM-202ENST00000421459 MYBPC3Q14896 1274 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 TCEAL1Q15170 157 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 DBN1Q16643 649 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 NKAIN1Q4KMZ8 207 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 RHBDD2Q6NTF9 364 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 MRPL14Q6P1L8 145 aaKnown RBP7.81□□□□□ -1.16
VIM-202ENST00000421459 SARM1Q6SZW1 724 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 Q6ZS92 163 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 BBS12Q6ZW61 710 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 VSTM4Q8IW00 320 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 PARP9Q8IXQ6 854 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 GPR135Q8IZ08 494 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 DNAJC22Q8N4W6 341 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 METTL27Q8N6F8 245 aaPredicted RBP7.81□□□□□ -1.16
VIM-202ENST00000421459 CLEC1AQ8NC01 280 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 ACTL9Q8TC94 416 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 N4BP2L2Q92802 583 aaPredicted RBP7.81□□□□□ -1.16
VIM-202ENST00000421459 ULK4Q96C45 1275 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 TBL1YQ9BQ87 522 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 MVB12BQ9H7P6 319 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 SYTL2Q9HCH5 934 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 IRAK4Q9NWZ3 460 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 SMARCAL1Q9NZC9 954 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 C5AR2Q9P296 337 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 IMPACTQ9P2X3 320 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 OSGIN2Q9Y236 505 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 PCDHGA10Q9Y5H3 936 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 SPTAN1Q13813 2472 aaKnown RBP7.81□□□□□ -1.16
VIM-202ENST00000421459 CENPEQ02224 2701 aa7.81□□□□□ -1.16
VIM-202ENST00000421459 TRBV5-4A0A0C4DH59 114 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 A0A0J9YY10 115 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 ARHGAP10A1A4S6 786 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 RCCD1A6NED2 376 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 ISM1B1AKI9 464 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 CFAP99D6REC4 459 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 APOC4-APOC2K7ER74 178 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 MATN2O00339 956 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 PEX12O00623 359 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 ZSCAN9O15535 394 aaPredicted RBP7.8□□□□□ -1.16
VIM-202ENST00000421459 MAP3K7O43318 606 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 OR1I1O60431 355 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 METTL18O95568 372 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 APOC2P02655 101 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 RBP3P10745 1247 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 PYGMP11217 842 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 ITGA3P26006 1051 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 ACADLP28330 430 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 HADHAP40939 763 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 GRIA3P42263 894 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 CD151P48509 253 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 EIF3EP60228 445 aaKnown RBP7.8□□□□□ -1.16
VIM-202ENST00000421459 PRPSAP1Q14558 356 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 POU6F1Q14863 301 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 CYP2A13Q16696 494 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 CCDC38Q502W7 563 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 CCDC181Q5TID7 509 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 LYPLAL1Q5VWZ2 237 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 ITPRIPL1Q6GPH6 555 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 DARS2Q6PI48 645 aaKnown RBP7.8□□□□□ -1.16
VIM-202ENST00000421459 IGFL3Q6UXB1 125 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 TTLL10Q6ZVT0 673 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 COX15Q7KZN9 410 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 TAX1BP1Q86VP1 789 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 HOOK3Q86VS8 718 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 KCNMB4Q86W47 210 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 HPS6Q86YV9 775 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 ZADH2Q8N4Q0 377 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 CATSPER1Q8NEC5 780 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 OR2Y1Q8NGV0 311 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 ELMO1Q92556 727 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 PTERQ96BW5 349 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 CDKN2AIPNLQ96HQ2 116 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 FER1L6-AS2Q96M78 137 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 IL17FQ96PD4 163 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 BARD1Q99728 777 aaKnown RBP7.8□□□□□ -1.16
VIM-202ENST00000421459 DPH2Q9BQC3 489 aaPredicted RBP7.8□□□□□ -1.16
VIM-202ENST00000421459 DHRS4Q9BTZ2 278 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 SOX17Q9H6I2 414 aaPredicted RBP7.8□□□□□ -1.16
VIM-202ENST00000421459 SLC6A20Q9NP91 592 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 STOX2Q9P2F5 926 aaPredicted RBP7.8□□□□□ -1.16
VIM-202ENST00000421459 NDOR1Q9UHB4 597 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 FBXL4Q9UKA2 621 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 ASF1AQ9Y294 204 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 PADI2Q9Y2J8 665 aa7.8□□□□□ -1.16
VIM-202ENST00000421459 AAR2Q9Y312 384 aaKnown RBP7.8□□□□□ -1.16
VIM-202ENST00000421459 DUSP10Q9Y6W6 482 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms