RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 A0A1W2PPM1 405 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 LILRA5A6NI73 299 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 FOXO6A8MYZ6 492 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 GOLGA8RI6L899 631 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 SLC16A5O15375 505 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 RGS16O15492 202 aaPredicted RBP17.06■□□□□ 0.32
LINC00271-201ENST00000421378 KDM1AO60341 852 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 KLHL2O95198 593 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 PYGBP11216 843 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 CYP2A7P20853 494 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 ALDH4A1P30038 563 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 GPR3P46089 330 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 DLG1Q12959 904 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 NR1D2Q14995 579 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 TRIP6Q15654 476 aaKnown RBP17.06■□□□□ 0.32
LINC00271-201ENST00000421378 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.06■□□□□ 0.32
LINC00271-201ENST00000421378 ADAMTSL2Q86TH1 951 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 RASGRP3Q8IV61 690 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 OR52E1Q8NGJ3 308 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 DLG3Q92796 817 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 RAD51AP1Q96B01 352 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 ZBTB9Q96C00 473 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 SLC12A9Q9BXP2 914 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 CENPHQ9H3R5 247 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 PARVBQ9HBI1 364 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 NMRAL1Q9HBL8 299 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 IGSF5Q9NSI5 407 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 IKZF3Q9UKT9 509 aa17.06■□□□□ 0.32
LINC00271-201ENST00000421378 PABPN1LA6NDY0 278 aaKnown RBP17.05■□□□□ 0.32
LINC00271-201ENST00000421378 GOLGA6L10A6NI86 522 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 CDC7O00311 574 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 TM4SF5O14894 197 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 ZW10O43264 779 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 GP1BAP07359 652 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 MYZAPP0CAP1 466 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 COL6A2P12110 1019 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 CSRP1P21291 193 aaKnown RBP17.05■□□□□ 0.32
LINC00271-201ENST00000421378 ACADVLP49748 655 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 TSNQ15631 228 aaKnown RBP17.05■□□□□ 0.32
LINC00271-201ENST00000421378 PERM1Q5SV97 790 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 KLC3Q6P597 504 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 SBSNQ6UWP8 590 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 FBXO15Q8NCQ5 510 aaPredicted RBP17.05■□□□□ 0.32
LINC00271-201ENST00000421378 MCOLN3Q8TDD5 553 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 NXNL1Q96CM4 212 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 TSNARE1Q96NA8 513 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 CCDC3Q9BQI4 270 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 TBC1D10AQ9BXI6 508 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 VIPAS39Q9H9C1 493 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 KCNK4Q9NYG8 393 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 CIDEBQ9UHD4 219 aa17.05■□□□□ 0.32
LINC00271-201ENST00000421378 PIEZO1Q92508 2521 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 KRT87PA6NCN2 255 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 SYF2O95926 243 aaKnown RBP17.04■□□□□ 0.32
LINC00271-201ENST00000421378 TOP3BO95985 862 aaKnown RBP17.04■□□□□ 0.32
LINC00271-201ENST00000421378 ENO2P09104 434 aaPredicted RBP17.04■□□□□ 0.32
LINC00271-201ENST00000421378 HIST1H2AGP0C0S8 130 aaPredicted RBP17.04■□□□□ 0.32
LINC00271-201ENST00000421378 KRT4P19013 534 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 TFEBP19484 476 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 HIST1H2ADP20671 130 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 EPHA4P54764 986 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 PHKG1Q16816 387 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 PPP1R3AQ16821 1122 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 TSNAXIP1Q2TAA8 658 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 CCSMST1Q4G0I0 132 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 FRA10AC1Q70Z53 315 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 SPRED1Q7Z699 444 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 GLRX5Q86SX6 157 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 CLEC14AQ86T13 490 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 TRABD2AQ86V40 505 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 PLD6Q8N2A8 252 aaKnown RBP17.04■□□□□ 0.32
LINC00271-201ENST00000421378 LCN9Q8WX39 176 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 JPH3Q8WXH2 748 aaPredicted RBP17.04■□□□□ 0.32
LINC00271-201ENST00000421378 KIAA1191Q96A73 305 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 PTERQ96BW5 349 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 HIST1H2AHQ96KK5 128 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 HIST1H2AJQ99878 128 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 H2AFJQ9BTM1 129 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 TRIM54Q9BYV2 358 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 TFB2MQ9H5Q4 396 aaKnown RBP17.04■□□□□ 0.32
LINC00271-201ENST00000421378 PLAGL1Q9UM63 463 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 NOVA2Q9UNW9 492 aaKnown RBP17.04■□□□□ 0.32
LINC00271-201ENST00000421378 PDE10AQ9Y233 779 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 CEP250Q9BV73 2442 aa17.04■□□□□ 0.32
LINC00271-201ENST00000421378 MYO1CO00159 1063 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 SDHBP21912 280 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 GLRBP48167 497 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 GRB7Q14451 532 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 ACAP2Q15057 778 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 RSPO4Q2I0M5 234 aaPredicted RBP17.03■□□□□ 0.32
LINC00271-201ENST00000421378 ISCA2Q86U28 154 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 LCA5Q86VQ0 697 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 SRRM1Q8IYB3 904 aaKnown RBP17.03■□□□□ 0.32
LINC00271-201ENST00000421378 RAB42Q8N4Z0 105 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 Q8N9G6 341 aaPredicted RBP17.03■□□□□ 0.32
LINC00271-201ENST00000421378 OR9A1PQ8NGU1 263 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 OR10G6Q8NH81 332 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 PGM2Q96G03 612 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 RAB11FIP5Q9BXF6 653 aa17.03■□□□□ 0.32
LINC00271-201ENST00000421378 SRMSQ9H3Y6 488 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms