RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 LMNAP02545 664 aaKnown RBP20.44■□□□□ 0.86
GPC1-202ENST00000420138 HTR6P50406 440 aa20.44■□□□□ 0.86
GPC1-202ENST00000420138 RAP1GDS1P52306 607 aa20.44■□□□□ 0.86
GPC1-202ENST00000420138 PPP2CBP62714 309 aa20.44■□□□□ 0.86
GPC1-202ENST00000420138 PPP2CAP67775 309 aa20.44■□□□□ 0.86
GPC1-202ENST00000420138 NFE2L1Q14494 772 aa20.44■□□□□ 0.86
GPC1-202ENST00000420138 PTCHD3Q3KNS1 767 aa20.44■□□□□ 0.86
GPC1-202ENST00000420138 EOGTQ5NDL2 527 aa20.44■□□□□ 0.86
GPC1-202ENST00000420138 NEK5Q6P3R8 708 aa20.44■□□□□ 0.86
GPC1-202ENST00000420138 LRRC70Q7Z2Q7 622 aa20.44■□□□□ 0.86
GPC1-202ENST00000420138 FBXL8Q96CD0 374 aa20.44■□□□□ 0.86
GPC1-202ENST00000420138 PREBQ9HCU5 417 aa20.44■□□□□ 0.86
GPC1-202ENST00000420138 MEI4A8MW99 385 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 FUCA1P04066 466 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 EPB42P16452 691 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 BDKRB1P46663 353 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 CCNG1P51959 295 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 MXRA7P84157 204 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 PTK2BQ14289 1009 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 PLA2G4EQ3MJ16 856 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 SCIMPQ6UWF3 145 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 EFL1Q7Z2Z2 1120 aaKnown RBP20.43■□□□□ 0.86
GPC1-202ENST00000420138 MILR1Q7Z6M3 343 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 METTL6Q8TCB7 284 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 HM13Q8TCT9 377 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 ATP6V1E2Q96A05 226 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 PYCR2Q96C36 320 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 WDR26Q9H7D7 661 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 EBF2Q9HAK2 575 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 ANGPTL3Q9Y5C1 460 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 TBC1D3DA0A087WVF3 549 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 TBC1D3IA0A087WXS9 549 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 TBC1D3EA0A087X179 549 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 TBC1D3KA0A087X1G2 549 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 TBC1D3FA6NER0 549 aaPredicted RBP20.43■□□□□ 0.86
GPC1-202ENST00000420138 TBC1D3LB9A6J9 549 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 ENTPD5O75356 428 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 C1orf105O95561 183 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 TBC1D3HP0C7X1 549 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 ACADLP28330 430 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 IGFALSP35858 605 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 PFN3P60673 137 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 SGCGQ13326 291 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 TBC1D3GQ6DHY5 549 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 TBC1D3CQ6IPX1 549 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 ZNF852Q6ZMS4 543 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 Q6ZSR9 355 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 KBTBD6Q86V97 674 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 TBC1D3Q8IZP1 549 aaPredicted RBP20.43■□□□□ 0.86
GPC1-202ENST00000420138 ZNF687Q8N1G0 1237 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 ENDOVQ8N8Q3 282 aaKnown RBP20.43■□□□□ 0.86
GPC1-202ENST00000420138 TM7SF3Q9NS93 570 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 THEGQ9P2T0 379 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 ANKRD12Q6UB98 2062 aa20.43■□□□□ 0.86
GPC1-202ENST00000420138 CHEK2O96017 543 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 CATP04040 527 aaKnown RBP20.42■□□□□ 0.86
GPC1-202ENST00000420138 EBLN1P0CF75 366 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 GABRG2P18507 467 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 MAT2AP31153 395 aaKnown RBP20.42■□□□□ 0.86
GPC1-202ENST00000420138 MAPK9P45984 424 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 PIK3CGP48736 1102 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 SQLEQ14534 574 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 HERC3Q15034 1050 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 Q6ZS52 159 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 FAM124AQ86V42 546 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 OXR1Q8N573 874 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 FBXO15Q8NCQ5 510 aaPredicted RBP20.42■□□□□ 0.86
GPC1-202ENST00000420138 RP9Q8TA86 221 aaKnown RBP20.42■□□□□ 0.86
GPC1-202ENST00000420138 TUBGCP3Q96CW5 907 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 ATG10Q9H0Y0 220 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 OR52A5Q9H2C5 316 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 DPEP2Q9H4A9 486 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 NKX1-2Q9UD57 310 aaPredicted RBP20.42■□□□□ 0.86
GPC1-202ENST00000420138 RNF11Q9Y3C5 154 aa20.42■□□□□ 0.86
GPC1-202ENST00000420138 TRPM6Q9BX84 2022 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 TCRBV21S2A2A0A5A6 115 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 PRAMEF4O60810 478 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 ANP32DO95626 131 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 THRAP10827 490 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 ATP4BP51164 291 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 PLOD1Q02809 727 aaPredicted RBP20.41■□□□□ 0.86
GPC1-202ENST00000420138 PRAMEF9Q5VWM5 478 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 OGFOD2Q6N063 350 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 LRRTM4Q86VH4 590 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 SNX32Q86XE0 403 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 SCUBE1Q8IWY4 988 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 CHCHD4Q8N4Q1 142 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 ASB12Q8WXK4 309 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 CCDC138Q96M89 665 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 PKP4Q99569 1192 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 CCT7Q99832 543 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 DCLRE1BQ9H816 532 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 FZD3Q9NPG1 666 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 STOX2Q9P2F5 926 aaPredicted RBP20.41■□□□□ 0.86
GPC1-202ENST00000420138 TRPS1Q9UHF7 1281 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 SLC22A14Q9Y267 594 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 CCL27Q9Y4X3 112 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 VPS4BO75351 444 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 WDR47O94967 919 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 HGFP14210 728 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms