RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 TMLHEQ9NVH6 421 aa3.84□□□□□ -1.79
HMGB3P20-201ENST00000417997 SPG21Q9NZD8 308 aa3.84□□□□□ -1.79
HMGB3P20-201ENST00000417997 RCOR3Q9P2K3 495 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P20-201ENST00000417997 IPO11Q9UI26 975 aaKnown RBP3.84□□□□□ -1.79
HMGB3P20-201ENST00000417997 DNPEPQ9ULA0 475 aa3.84□□□□□ -1.79
HMGB3P20-201ENST00000417997 NAALADL1Q9UQQ1 740 aa3.84□□□□□ -1.79
HMGB3P20-201ENST00000417997 SNX24Q9Y343 169 aa3.84□□□□□ -1.79
HMGB3P20-201ENST00000417997 MIA3Q5JRA6 1907 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 IGLV5-39A0A0G2JS06 123 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 GOLGA6L10A6NI86 522 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 HHLA1C9JL84 531 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 PRYO14603 147 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 DNALI1O14645 258 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 PRRG1O14668 218 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 AREL1O15033 823 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 IRAK2O43187 625 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 CREB3O43889 395 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF189O75820 626 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 MOCS2O96007 188 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 IFNB1P01574 187 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 APOEP02649 317 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 CD48P09326 243 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 HAPLN1P10915 354 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 MYL4P12829 197 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 PECAM1P16284 738 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 GOT1P17174 413 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 YWHAQP27348 245 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 NDUFS1P28331 727 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 DUSP1P28562 367 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 OAS2P29728 719 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 ELF1P32519 619 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 SERPINB6P35237 376 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 IDUAP35475 653 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 RPL21P46778 160 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 STT3AP46977 705 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 ARSEP51690 589 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 PLTPP55058 493 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 BASP1P80723 227 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 CAV1Q03135 178 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 SRSF1Q07955 248 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 IFFO1Q0D2I5 559 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 GPR17Q13304 367 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 PLD1Q13393 1074 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 GAB1Q13480 694 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLMAPQ14BN4 828 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 TRIP13Q15645 432 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 DPYSL2Q16555 572 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 CA9Q16790 459 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 RAB6CQ53S08 254 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 ANKRD20A8PQ5CZ79 823 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 BRMS1LQ5PSV4 323 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 SDHAF4Q5VUM1 108 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 BSPRYQ5W0U4 402 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 DUPD1Q68J44 220 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 MRNIPQ6NTE8 343 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 B4GALNT4Q76KP1 1039 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 BZW1Q7L1Q6 419 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 TMCO2Q7Z6W1 182 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 PCGF5Q86SE9 256 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 TADA2BQ86TJ2 420 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 TMEM173Q86WV6 379 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 VSIG1Q86XK7 387 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 PSTKQ8IV42 348 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCDC28AQ8IWP9 274 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC39A11Q8N1S5 342 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 ALLCQ8N6M5 410 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 ATAD1Q8NBU5 361 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 STKLD1Q8NE28 680 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 CMASQ8NFW8 434 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 SCAMP5Q8TAC9 235 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 MPLKIPQ8TAP9 179 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 DQX1Q8TE96 717 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 BADQ92934 168 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLCO2A1Q92959 643 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 TOP1MTQ969P6 601 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 NTAN1Q96AB6 310 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 IGSF21Q96ID5 467 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 RNF157Q96PX1 679 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 LBHD1Q9BQE6 289 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 HERPUD2Q9BSE4 406 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 TUBB6Q9BUF5 446 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 HTATIP2Q9BUP3 242 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 FUT8Q9BYC5 575 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 TRIM2Q9C040 744 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 RAB6CQ9H0N0 254 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 PCDHAC1Q9H158 963 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 CWH43Q9H720 699 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 VIPAS39Q9H9C1 493 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 PRDM16Q9HAZ2 1276 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 TLR8Q9NR97 1041 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 MRPL17Q9NRX2 175 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 OLA1Q9NTK5 396 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 PIGVQ9NUD9 493 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 TMEM30AQ9NV96 361 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 TMEM51Q9NW97 253 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF446Q9NWS9 450 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 COMMD8Q9NX08 183 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 SEMA5BQ9P283 1151 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 MTRRQ9UBK8 725 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms