RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MYO19Q96H55 970 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 BARD1Q99728 777 aaKnown RBP14.17□□□□□ -0.14
HDAC9-208ENST00000417496 YTHDF1Q9BYJ9 559 aaKnown RBP14.17□□□□□ -0.14
HDAC9-208ENST00000417496 TNKS2Q9H2K2 1166 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 LRFN2Q9ULH4 789 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 OARD1Q9Y530 152 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 BNIP3LO60238 219 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 NOL3O60936 208 aaKnown RBP14.17□□□□□ -0.14
HDAC9-208ENST00000417496 ABCB7O75027 752 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 PGLSO95336 258 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 GLUD1P00367 558 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 BCKDHAP12694 445 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 BPIP17213 487 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 TACR1P25103 407 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 HNF1BP35680 557 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 VAC14Q08AM6 782 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 CBX2Q14781 532 aaPredicted RBP14.17□□□□□ -0.14
HDAC9-208ENST00000417496 TAF12Q16514 161 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 GALNT18Q6P9A2 607 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 C16orf87Q6PH81 154 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 PARP8Q8N3A8 854 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 RNF175Q8N4F7 328 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 CNIH3Q8TBE1 160 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 PYCR2Q96C36 320 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 EGLN2Q96KS0 407 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 TSSK3Q96PN8 268 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 CCDC90BQ9GZT6 254 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 KAT8Q9H7Z6 458 aaKnown RBP14.17□□□□□ -0.14
HDAC9-208ENST00000417496 MAGEE1Q9HCI5 957 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 PAK1IP1Q9NWT1 392 aaPredicted RBP14.17□□□□□ -0.14
HDAC9-208ENST00000417496 TRPM5Q9NZQ8 1165 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 MBD1Q9UIS9 605 aaPredicted RBP14.17□□□□□ -0.14
HDAC9-208ENST00000417496 PCDHB1Q9Y5F3 818 aa14.17□□□□□ -0.14
HDAC9-208ENST00000417496 GRXCR2A6NFK2 248 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 TRIM64BA6NI03 449 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 MANBAO00462 879 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 XPNPEP2O43895 674 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CREG1O75629 220 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CDKN2CP42773 168 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 RGS4P49798 205 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 SMAD3P84022 425 aaKnown RBP14.16□□□□□ -0.14
HDAC9-208ENST00000417496 GRSF1Q12849 480 aaKnown RBP eCLIP14.16□□□□□ -0.14
HDAC9-208ENST00000417496 ATP1A4Q13733 1029 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 ZXDCQ2QGD7 858 aaPredicted RBP14.16□□□□□ -0.14
HDAC9-208ENST00000417496 RUNDC3AQ59EK9 446 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 GPRC6AQ5T6X5 926 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CACHD1Q5VU97 1274 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 GTF2IRD2BQ6EKJ0 949 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CHST9Q7L1S5 443 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 LRRC8DQ7L1W4 858 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 PIWIL3Q7Z3Z3 882 aaKnown RBP14.16□□□□□ -0.14
HDAC9-208ENST00000417496 GTF2IRD2Q86UP8 949 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 RBFAQ8N0V3 343 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 ZBTB2Q8N680 514 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 PLD4Q96BZ4 506 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CCDC115Q96NT0 180 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CDK5RAP1Q96SZ6 601 aaKnown RBP14.16□□□□□ -0.14
HDAC9-208ENST00000417496 ACPTQ9BZG2 426 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CLMPQ9H6B4 373 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CWH43Q9H720 699 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 TBC1D23Q9NUY8 699 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 FAIMQ9NVQ4 179 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CRLS1Q9UJA2 301 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CLEC4EQ9ULY5 219 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 PDE10AQ9Y233 779 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 H7C4K7 107 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CA12O43570 354 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 INMTO95050 263 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 PARNO95453 639 aaKnown RBP14.16□□□□□ -0.14
HDAC9-208ENST00000417496 BCL10O95999 233 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CYP4B1P13584 511 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 DGKAP23743 735 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 DCTP40126 519 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 IL1RL1Q01638 556 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 SLC14A1Q13336 389 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 SPCS2Q15005 226 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CERS6Q6ZMG9 384 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 RFLNAQ6ZTI6 216 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 ZSWIM9Q86XI8 627 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 ZNF555Q8NEP9 628 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 PNPT1Q8TCS8 783 aaKnown RBP14.16□□□□□ -0.14
HDAC9-208ENST00000417496 CCDC138Q96M89 665 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 TUBA1CQ9BQE3 449 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 FUNDC2Q9BWH2 189 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 KLF16Q9BXK1 252 aaPredicted RBP14.16□□□□□ -0.14
HDAC9-208ENST00000417496 VNN3Q9NY84 501 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 GNPTGQ9UJJ9 305 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 FRMPD3Q5JV73 1810 aa14.16□□□□□ -0.14
HDAC9-208ENST00000417496 PRRC2BQ5JSZ5 2229 aaKnown RBP14.16□□□□□ -0.14
HDAC9-208ENST00000417496 LOC100130705A0A1B0GUX0 176 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 K7EPI3 171 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 DIRAS1O95057 198 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 PDYNP01213 254 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 IL6P05231 212 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 EPB42P16452 691 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 EPORP19235 508 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 CCR3P51677 355 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 TMBIM6P55061 237 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 MTA1Q13330 715 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 AQP6Q13520 282 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms