RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TCTN2Q96GX1 697 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 RUFY1Q96T51 708 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 TSSK1BQ9BXA7 367 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 CHRNA10Q9GZZ6 450 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 EIF2B3Q9NR50 452 aaKnown RBP24.52■■□□□ 1.52
VEGFA-208ENST00000417285 SLC2A6Q9UGQ3 507 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 ICKQ9UPZ9 632 aa24.52■■□□□ 1.52
VEGFA-208ENST00000417285 BSNQ9UPA5 3926 aa24.51■■□□□ 1.51
VEGFA-208ENST00000417285 BHMG1C9JSJ3 638 aaPredicted RBP24.51■■□□□ 1.51
VEGFA-208ENST00000417285 CEP104O60308 925 aa24.51■■□□□ 1.51
VEGFA-208ENST00000417285 RORAP35398 523 aa24.51■■□□□ 1.51
VEGFA-208ENST00000417285 ITGA1P56199 1179 aa24.51■■□□□ 1.51
VEGFA-208ENST00000417285 BRD3Q15059 726 aa24.51■■□□□ 1.51
VEGFA-208ENST00000417285 FASTKD1Q53R41 847 aaKnown RBP24.51■■□□□ 1.51
VEGFA-208ENST00000417285 GPR135Q8IZ08 494 aa24.51■■□□□ 1.51
VEGFA-208ENST00000417285 HOMER3Q9NSC5 361 aa24.51■■□□□ 1.51
VEGFA-208ENST00000417285 ANAPC5Q9UJX4 755 aa24.51■■□□□ 1.51
VEGFA-208ENST00000417285 PPP2R2CQ9Y2T4 447 aa24.51■■□□□ 1.51
VEGFA-208ENST00000417285 E7EQ34 232 aa24.5■■□□□ 1.51
VEGFA-208ENST00000417285 AP3B1O00203 1094 aa24.5■■□□□ 1.51
VEGFA-208ENST00000417285 RPS18P62269 152 aaKnown RBP24.5■■□□□ 1.51
VEGFA-208ENST00000417285 BASP1P80723 227 aaKnown RBP24.5■■□□□ 1.51
VEGFA-208ENST00000417285 ABRQ12979 859 aa24.5■■□□□ 1.51
VEGFA-208ENST00000417285 DNAJC21Q5F1R6 531 aaKnown RBP24.5■■□□□ 1.51
VEGFA-208ENST00000417285 ZNF789Q5FWF6 425 aa24.5■■□□□ 1.51
VEGFA-208ENST00000417285 AARS2Q5JTZ9 985 aaKnown RBP24.5■■□□□ 1.51
VEGFA-208ENST00000417285 PRAMEF17Q5VTA0 474 aa24.5■■□□□ 1.51
VEGFA-208ENST00000417285 ASZ1Q8WWH4 475 aa24.5■■□□□ 1.51
VEGFA-208ENST00000417285 N4BP2L2Q92802 583 aaPredicted RBP24.5■■□□□ 1.51
VEGFA-208ENST00000417285 ZNF778Q96MU6 729 aa24.5■■□□□ 1.51
VEGFA-208ENST00000417285 NRTNQ99748 197 aa24.5■■□□□ 1.51
VEGFA-208ENST00000417285 CARD6Q9BX69 1037 aa24.5■■□□□ 1.51
VEGFA-208ENST00000417285 SLC7A5P2Q9GIP4 190 aa24.5■■□□□ 1.51
VEGFA-208ENST00000417285 TDRKHQ9Y2W6 561 aaKnown RBP24.5■■□□□ 1.51
VEGFA-208ENST00000417285 PRRC2CQ9Y520 2896 aaKnown RBP24.49■■□□□ 1.51
VEGFA-208ENST00000417285 SEC16AO15027 2179 aa24.49■■□□□ 1.51
VEGFA-208ENST00000417285 OR1I1O60431 355 aa24.49■■□□□ 1.51
VEGFA-208ENST00000417285 CHRM5P08912 532 aaPredicted RBP24.49■■□□□ 1.51
VEGFA-208ENST00000417285 FOXK1P85037 733 aa24.49■■□□□ 1.51
VEGFA-208ENST00000417285 PCID2Q5JVF3 399 aa24.49■■□□□ 1.51
VEGFA-208ENST00000417285 CDHR3Q6ZTQ4 885 aa24.49■■□□□ 1.51
VEGFA-208ENST00000417285 OR2A14Q96R47 310 aa24.49■■□□□ 1.51
VEGFA-208ENST00000417285 PCMTD2Q9NV79 361 aa24.49■■□□□ 1.51
VEGFA-208ENST00000417285 TCFL5Q9UL49 500 aa24.49■■□□□ 1.51
VEGFA-208ENST00000417285 SNX7Q9UNH6 387 aa24.49■■□□□ 1.51
VEGFA-208ENST00000417285 AP1M2Q9Y6Q5 423 aa24.49■■□□□ 1.51
VEGFA-208ENST00000417285 LRRK2Q5S007 2527 aa24.49■■□□□ 1.51
VEGFA-208ENST00000417285 PVRP15151 417 aa24.48■■□□□ 1.51
VEGFA-208ENST00000417285 UGT2B7P16662 529 aa24.48■■□□□ 1.51
VEGFA-208ENST00000417285 AGXTP21549 392 aa24.48■■□□□ 1.51
VEGFA-208ENST00000417285 CXCR5P32302 372 aa24.48■■□□□ 1.51
VEGFA-208ENST00000417285 SESN2P58004 480 aaPredicted RBP24.48■■□□□ 1.51
VEGFA-208ENST00000417285 ZNF534Q76KX8 674 aa24.48■■□□□ 1.51
VEGFA-208ENST00000417285 SYTL1Q8IYJ3 562 aa24.48■■□□□ 1.51
VEGFA-208ENST00000417285 ENDOVQ8N8Q3 282 aaKnown RBP24.48■■□□□ 1.51
VEGFA-208ENST00000417285 C19orf47Q8N9M1 422 aaKnown RBP24.48■■□□□ 1.51
VEGFA-208ENST00000417285 C17orf62Q9BQA9 187 aa24.48■■□□□ 1.51
VEGFA-208ENST00000417285 IL22Q9GZX6 179 aa24.48■■□□□ 1.51
VEGFA-208ENST00000417285 KLHL25Q9H0H3 589 aa24.48■■□□□ 1.51
VEGFA-208ENST00000417285 ZNF749O43361 778 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 RPN2P04844 631 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 KCNJ1P48048 391 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 NPY2RP49146 381 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 IL10RAQ13651 578 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 KIR2DS3Q14952 304 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 LCN10Q6JVE6 187 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 SLC22A15Q8IZD6 547 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 AP1M1Q9BXS5 423 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 ING2Q9H160 280 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 ACSS2Q9NR19 701 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 CHRAC1Q9NRG0 131 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 CATSPERZQ9NTU4 200 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 BFARQ9NZS9 450 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 PCDHGA9Q9Y5G4 932 aaKnown RBP24.47■■□□□ 1.51
VEGFA-208ENST00000417285 PIKFYVEQ9Y2I7 2098 aa24.47■■□□□ 1.51
VEGFA-208ENST00000417285 K7EM74 188 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 CD63P08962 238 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 TPBGLP0DKB5 382 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 CCR7P32248 378 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 TTPAP49638 278 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 HSPA14Q0VDF9 509 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 SLC5A12Q1EHB4 618 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 NAPRTQ6XQN6 538 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 ADAMTS17Q8TE56 1095 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 DHRS4Q9BTZ2 278 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 TRIM55Q9BYV6 548 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 SPHK1Q9NYA1 384 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 SPTBP11277 2137 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 COL12A1Q99715 3063 aa24.46■■□□□ 1.51
VEGFA-208ENST00000417285 A0A0J9YY10 115 aa24.45■■□□□ 1.5
VEGFA-208ENST00000417285 C9J4A7 227 aa24.45■■□□□ 1.5
VEGFA-208ENST00000417285 PRMT5O14744 637 aaPredicted RBP24.45■■□□□ 1.5
VEGFA-208ENST00000417285 CD3EAPO15446 510 aaKnown RBP24.45■■□□□ 1.5
VEGFA-208ENST00000417285 GPC4O75487 556 aa24.45■■□□□ 1.5
VEGFA-208ENST00000417285 OR2B3O76000 313 aa24.45■■□□□ 1.5
VEGFA-208ENST00000417285 APOA4P06727 396 aa24.45■■□□□ 1.5
VEGFA-208ENST00000417285 CAPN1P07384 714 aa24.45■■□□□ 1.5
VEGFA-208ENST00000417285 NR1D1P20393 614 aa24.45■■□□□ 1.5
VEGFA-208ENST00000417285 CCL11P51671 97 aa24.45■■□□□ 1.5
VEGFA-208ENST00000417285 CDK16Q00536 496 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms