RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 WASP42768 502 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 ZNF782Q6ZMW2 699 aaPredicted RBP11.84□□□□□ -0.51
UBR4-205ENST00000417040 NCCRP1Q6ZVX7 275 aaPredicted RBP11.84□□□□□ -0.51
UBR4-205ENST00000417040 RBM23Q86U06 439 aaKnown RBP11.84□□□□□ -0.51
UBR4-205ENST00000417040 CHERPQ8IWX8 916 aaKnown RBP11.84□□□□□ -0.51
UBR4-205ENST00000417040 SLC15A3Q8IY34 581 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 OR10H5Q8NGA6 315 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 HIPK3Q9H422 1215 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 TMEM27Q9HBJ8 222 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 CFAP97Q9P2B7 532 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 MATN3O15232 486 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 NARSO43776 548 aaKnown RBP11.84□□□□□ -0.51
UBR4-205ENST00000417040 CDRT1O95170 752 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 PTPN9P43378 593 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 CLK3P49761 638 aaKnown RBP11.84□□□□□ -0.51
UBR4-205ENST00000417040 RPS14P62263 151 aaKnown RBP11.84□□□□□ -0.51
UBR4-205ENST00000417040 HSDL1Q3SXM5 330 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 ADNP2Q6IQ32 1131 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 KLHL35Q6PF15 583 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 GALNT6Q8NCL4 622 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 CCDC120Q96HB5 630 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 CST11Q9H112 138 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 XPNPEP1Q9NQW7 623 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 FAM234BA2RU67 622 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 ATG13O75143 517 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 CSTF2P33240 577 aaKnown RBP eCLIP11.84□□□□□ -0.51
UBR4-205ENST00000417040 MAGEA2P43356 314 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 LARS2Q15031 903 aaKnown RBP11.84□□□□□ -0.51
UBR4-205ENST00000417040 ZNF431Q8TF32 576 aaPredicted RBP11.84□□□□□ -0.51
UBR4-205ENST00000417040 ISOC1Q96CN7 298 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 AIF1LQ9BQI0 150 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 C1QTNF7Q9BXJ2 289 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 ZNF304Q9HCX3 659 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 FAM105AQ9NUU6 356 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 ARHGAP23Q9P227 1491 aa11.84□□□□□ -0.51
UBR4-205ENST00000417040 DAPL1A0PJW8 107 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 URADA6NGE7 173 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 IRF6O14896 467 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 B4GALT4O60513 344 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 XKP51811 444 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 AIF1P55008 147 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 MLLT10P55197 1068 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 AP3S2P59780 193 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 NFKB2Q00653 900 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 PLEKHG6Q3KR16 790 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 SLC38A4Q969I6 547 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 PYCR2Q96C36 320 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 ZC3H10Q96K80 434 aaKnown RBP11.83□□□□□ -0.52
UBR4-205ENST00000417040 MRPL9Q9BYD2 267 aaKnown RBP11.83□□□□□ -0.52
UBR4-205ENST00000417040 TTTY10Q9BZA0 68 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 TREM1Q9NP99 234 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 PTCH2Q9Y6C5 1203 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 TRAV6A0A075B6T7 132 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 SMIM28A0A1B0GU29 152 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 CH25HO95992 272 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 ENGP17813 658 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 TACR2P21452 398 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 EIF2S3P41091 472 aaKnown RBP11.83□□□□□ -0.52
UBR4-205ENST00000417040 NKX2-5P52952 324 aaPredicted RBP11.83□□□□□ -0.52
UBR4-205ENST00000417040 RHDQ02161 417 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 CREB5Q02930 508 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 ASTE1Q2TB18 679 aaPredicted RBP11.83□□□□□ -0.52
UBR4-205ENST00000417040 FAAH2Q6GMR7 532 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 CAND1Q86VP6 1230 aaKnown RBP11.83□□□□□ -0.52
UBR4-205ENST00000417040 MARCH9Q86YJ5 346 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 SNX29P2Q8IUI4 249 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 KCT2Q8NC54 265 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 FAM163AQ96GL9 167 aaPredicted RBP11.83□□□□□ -0.52
UBR4-205ENST00000417040 LMLNQ96KR4 655 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 TSPAN18Q96SJ8 248 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 ASAH2Q9NR71 780 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 WRAP73Q9P2S5 460 aaPredicted RBP11.83□□□□□ -0.52
UBR4-205ENST00000417040 MED31Q9Y3C7 131 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 ISPDA4D126 451 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 NDST3O95803 873 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 SCGB1D2O95969 90 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 LAMP2P13473 410 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 ITIH1P19827 911 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 EFR3AQ14156 821 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 PCED1BQ96HM7 432 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 BTN2A3PQ96KV6 586 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 B3GNT4Q9C0J1 378 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 NECTIN3Q9NQS3 549 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 AASSQ9UDR5 926 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 YES1P07947 543 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 ASMTP46597 345 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 CLCN4P51793 760 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 HERVK_113P63132 956 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 SLC3A1Q07837 685 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 PARP15Q460N3 678 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 SCGB2B2Q4G0G5 96 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 MON1AQ86VX9 555 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 RGL4Q8IZJ4 473 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 GRHL3Q8TE85 626 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 ERVK-6Q9BXR3 956 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 KCNN2Q9H2S1 579 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 RHCGQ9UBD6 479 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 XYLBO75191 536 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms