RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 KCND3Q9UK17 655 aa14.62□□□□□ -0.07
UBXN4-203ENST00000416538 HECTD1Q9ULT8 2610 aa14.62□□□□□ -0.07
UBXN4-203ENST00000416538 POLHQ9Y253 713 aa14.62□□□□□ -0.07
UBXN4-203ENST00000416538 ASF1AQ9Y294 204 aa14.62□□□□□ -0.07
UBXN4-203ENST00000416538 RELNP78509 3460 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 MDC1Q14676 2089 aaKnown RBP14.61□□□□□ -0.07
UBXN4-203ENST00000416538 KRT87PA6NCN2 255 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 E7EVH7 732 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 FGGP02679 453 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 CHRM5P08912 532 aaPredicted RBP14.61□□□□□ -0.07
UBXN4-203ENST00000416538 CCNYL3P0C7X3 344 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 MSL3P1P0C860 447 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 NMBRP28336 390 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 PTPN4P29074 926 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 CXCR5P32302 372 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 PMS2P54278 862 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 SESN2P58004 480 aaPredicted RBP14.61□□□□□ -0.07
UBXN4-203ENST00000416538 CHAF1BQ13112 559 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 GRB7Q14451 532 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 CCNG2Q16589 344 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 PTCHD3Q3KNS1 767 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 ZNF385CQ66K41 422 aaPredicted RBP14.61□□□□□ -0.07
UBXN4-203ENST00000416538 BPHLQ86WA6 291 aaPredicted RBP14.61□□□□□ -0.07
UBXN4-203ENST00000416538 TMEM151BQ8IW70 566 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 LRRC8AQ8IWT6 810 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 FAM20CQ8IXL6 584 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 DSELQ8IZU8 1212 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 KRT222Q8N1A0 295 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 CCDC89Q8N998 374 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 OR6P1Q8NGX9 317 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 OR4L1Q8NH43 312 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 OR5K2Q8NHB8 316 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 MR1Q95460 341 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 SGSM3Q96HU1 749 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 LRFN5Q96NI6 719 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 ALS2CR12Q96Q35 445 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 OR2A14Q96R47 310 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 AP1M1Q9BXS5 423 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 CLMPQ9H6B4 373 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 EIF2B3Q9NR50 452 aaKnown RBP14.61□□□□□ -0.07
UBXN4-203ENST00000416538 PCDHB3Q9Y5E6 796 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 DOCK10Q96BY6 2186 aa14.61□□□□□ -0.07
UBXN4-203ENST00000416538 FLNCQ14315 2725 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 PIPSLA2A3N6 862 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 C2orf74A8MZ97 194 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 GOLGA6L6A8MZA4 724 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 GPC4O75487 556 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 CCDC175P0C221 793 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 PRAMEP78395 509 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 BASP1P80723 227 aaKnown RBP14.6□□□□□ -0.07
UBXN4-203ENST00000416538 UGT8Q16880 541 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 SYTL3Q4VX76 610 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 TMTC4Q5T4D3 741 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 SPNS2Q8IVW8 549 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 SLC22A15Q8IZD6 547 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 PRELID2Q8N945 189 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 C19orf47Q8N9M1 422 aaKnown RBP14.6□□□□□ -0.07
UBXN4-203ENST00000416538 LINC01555Q8NAE3 123 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 PPHLN1Q8NEY8 458 aaKnown RBP14.6□□□□□ -0.07
UBXN4-203ENST00000416538 OR8K5Q8NH50 307 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 ADAMTS17Q8TE56 1095 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.6□□□□□ -0.071e-6■■■■■ 31.4
UBXN4-203ENST00000416538 TRIM56Q9BRZ2 755 aaKnown RBP14.6□□□□□ -0.07
UBXN4-203ENST00000416538 SYBUQ9NX95 663 aa14.6□□□□□ -0.07
UBXN4-203ENST00000416538 TDRKHQ9Y2W6 561 aaKnown RBP14.6□□□□□ -0.07
UBXN4-203ENST00000416538 MEN1O00255 615 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 QSOX1O00391 747 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 OR56A5P0C7T3 313 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 PKLRP30613 574 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 SHMT2P34897 504 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 LACTB2Q53H82 288 aaPredicted RBP14.59□□□□□ -0.07
UBXN4-203ENST00000416538 IZUMO3Q5VZ72 239 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 TTC27Q6P3X3 843 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 CES3Q6UWW8 571 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 SYTL1Q8IYJ3 562 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 TBC1D21Q8IYX1 336 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 ENDOVQ8N8Q3 282 aaKnown RBP14.59□□□□□ -0.07
UBXN4-203ENST00000416538 PEX13Q92968 403 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 IL17FQ96PD4 163 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 P2RY12Q9H244 342 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 ACTR5Q9H9F9 607 aaPredicted RBP14.59□□□□□ -0.07
UBXN4-203ENST00000416538 CATSPERZQ9NTU4 200 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 TLK1Q9UKI8 766 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 TTC7AQ9ULT0 858 aaPredicted RBP14.59□□□□□ -0.07
UBXN4-203ENST00000416538 RUVBL2Q9Y230 463 aaKnown RBP14.59□□□□□ -0.07
UBXN4-203ENST00000416538 DRG1Q9Y295 367 aaKnown RBP14.59□□□□□ -0.07
UBXN4-203ENST00000416538 MAN2B2Q9Y2E5 1009 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 KLHL20Q9Y2M5 609 aa14.59□□□□□ -0.07
UBXN4-203ENST00000416538 CYSRT1A8MQ03 144 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 RFPL1O75677 317 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 TMEM63AO94886 807 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 RECKO95980 971 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 GAS8O95995 478 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 F7P08709 466 aaPredicted RBP14.58□□□□□ -0.08
UBXN4-203ENST00000416538 MGAT1P26572 445 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 CASRP41180 1078 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 PTGIRP43119 386 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 CSRP3P50461 194 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 TERF1P54274 439 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 ITGA1P56199 1179 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms