RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 GPR33Q49SQ1 333 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 SYTL3Q4VX76 610 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 NAPRTQ6XQN6 538 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.67■□□□□ 0.581e-6■■■■■ 31.4
UBXN4-202ENST00000415164 TCTN2Q96GX1 697 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 C5orf34Q96MH7 638 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 IP6K3Q96PC2 410 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 AP1M2Q9Y6Q5 423 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 UNC79Q9P2D8 2635 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 ANKUB1A6NFN9 424 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 ZSCAN9O15535 394 aaPredicted RBP18.66■□□□□ 0.58
UBXN4-202ENST00000415164 HCRTR1O43613 425 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 KLF7O75840 302 aaPredicted RBP18.66■□□□□ 0.58
UBXN4-202ENST00000415164 CLDN1O95832 211 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 CTSBP07858 339 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 NAP1L1P55209 391 aaKnown RBP18.66■□□□□ 0.58
UBXN4-202ENST00000415164 MYBPC3Q14896 1274 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 ZIC1Q15915 447 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 DCAF10Q5QP82 559 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 ZNF385CQ66K41 422 aaPredicted RBP18.66■□□□□ 0.58
UBXN4-202ENST00000415164 UNC5AQ6ZN44 842 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 ZADH2Q8N4Q0 377 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 TM9SF4Q92544 642 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 ELMO1Q92556 727 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 ALS2CR12Q96Q35 445 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 PIH1D1Q9NWS0 290 aaKnown RBP18.66■□□□□ 0.58
UBXN4-202ENST00000415164 P4HTMQ9NXG6 502 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 SPHK1Q9NYA1 384 aa18.66■□□□□ 0.58
UBXN4-202ENST00000415164 COPG1Q9Y678 874 aaKnown RBP18.66■□□□□ 0.58
UBXN4-202ENST00000415164 PRRC2CQ9Y520 2896 aaKnown RBP18.66■□□□□ 0.58
UBXN4-202ENST00000415164 PCSK5Q92824 1860 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 A0A0J9YY10 115 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 ISM1B1AKI9 464 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 PTMAP06454 111 aaKnown RBP18.65■□□□□ 0.58
UBXN4-202ENST00000415164 CHRM5P08912 532 aaPredicted RBP18.65■□□□□ 0.58
UBXN4-202ENST00000415164 ALAS2P22557 587 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 SHMT2P34897 504 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 DCTP40126 519 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 CSE1LP55060 971 aaKnown RBP18.65■□□□□ 0.58
UBXN4-202ENST00000415164 RPA4Q13156 261 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 POU6F1Q14863 301 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 RHBDD2Q6NTF9 364 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 C11orf63Q6NUN7 778 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 TAB3Q8N5C8 712 aaPredicted RBP18.65■□□□□ 0.58
UBXN4-202ENST00000415164 RNF214Q8ND24 703 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 SPATA13Q96N96 652 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 OR2A14Q96R47 310 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 OSBPL8Q9BZF1 889 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 SLC5A6Q9Y289 635 aa18.65■□□□□ 0.58
UBXN4-202ENST00000415164 PJA2O43164 708 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 ALOX12BO75342 701 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 CBX6O95503 412 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 IGHEP01854 428 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 ITGA3P26006 1051 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 HADHBP55084 474 aaKnown RBP18.64■□□□□ 0.57
UBXN4-202ENST00000415164 MSLNQ13421 630 aaPredicted RBP18.64■□□□□ 0.57
UBXN4-202ENST00000415164 SPA17Q15506 151 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 DBN1Q16643 649 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 DENND5AQ6IQ26 1287 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 ARHGEF18Q6ZSZ5 1173 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 FAM20CQ8IXL6 584 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 OR2Y1Q8NGV0 311 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 PROKR1Q8TCW9 393 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 GBP5Q96PP8 586 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 PPP1R2P1Q96PQ5 205 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 NDC1Q9BTX1 674 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 AP1M1Q9BXS5 423 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 ZNF552Q9H707 407 aaPredicted RBP18.64■□□□□ 0.57
UBXN4-202ENST00000415164 PCDHA13Q9Y5I0 950 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 PRSS21Q9Y6M0 314 aa18.64■□□□□ 0.57
UBXN4-202ENST00000415164 IGLV3-16A0A075B6K0 115 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 LIN7AO14910 233 aaPredicted RBP18.63■□□□□ 0.57
UBXN4-202ENST00000415164 KLHL41O60662 606 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 IPO13O94829 963 aaKnown RBP18.63■□□□□ 0.57
UBXN4-202ENST00000415164 LDLRP01130 860 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 COPS2P61201 443 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 CACNG1Q06432 222 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 NKAIN1Q4KMZ8 207 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 ZNF658BQ4V348 819 aaPredicted RBP18.63■□□□□ 0.57
UBXN4-202ENST00000415164 AADACL2Q6P093 401 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 TMTC1Q8IUR5 882 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 TMEM151BQ8IW70 566 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 PIANPQ8IYJ0 282 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 PTERQ96BW5 349 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 RANBP9Q96S59 729 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 ZBTB20Q9HC78 741 aaPredicted RBP18.63■□□□□ 0.57
UBXN4-202ENST00000415164 ATP13A2Q9NQ11 1180 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 NLE1Q9NVX2 485 aaPredicted RBP18.63■□□□□ 0.57
UBXN4-202ENST00000415164 IMPACTQ9P2X3 320 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 FEZ2Q9UHY8 353 aaPredicted RBP18.63■□□□□ 0.57
UBXN4-202ENST00000415164 SRPK3Q9UPE1 567 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 KLHL20Q9Y2M5 609 aa18.63■□□□□ 0.57
UBXN4-202ENST00000415164 TRBV5-4A0A0C4DH59 114 aa18.62■□□□□ 0.57
UBXN4-202ENST00000415164 OR51F1A6NGY5 319 aa18.62■□□□□ 0.57
UBXN4-202ENST00000415164 ENO4A6NNW6 628 aa18.62■□□□□ 0.57
UBXN4-202ENST00000415164 CNOT3O75175 753 aaKnown RBP18.62■□□□□ 0.57
UBXN4-202ENST00000415164 AP2A2O94973 939 aa18.62■□□□□ 0.57
UBXN4-202ENST00000415164 FTH1P02794 183 aa18.62■□□□□ 0.57
UBXN4-202ENST00000415164 CD63P08962 238 aa18.62■□□□□ 0.57
UBXN4-202ENST00000415164 CTNNA1P35221 906 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms