RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 KCTD14Q9BQ13 255 aaPredicted RBP13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 OSBPL6Q9BZF3 934 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 IRF2BPLQ9H1B7 796 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 LINC00597Q9H2U6 94 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 EBF3Q9H4W6 596 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 ACTR8Q9H981 624 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 GEMIN8Q9NWZ8 242 aaKnown RBP13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 CLDND1Q9NY35 253 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 NDUFA13Q9P0J0 144 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 MAPRE3Q9UPY8 281 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 SLC27A6Q9Y2P4 619 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 TMED5Q9Y3A6 229 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 SNX13Q9Y5W8 968 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 PTGDR2Q9Y5Y4 395 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 ST14Q9Y5Y6 855 aa13.2□□□□□ -0.3
SSR4P1-201ENST00000415143 HELZP42694 1942 aaKnown RBP13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 SERTM1A2A2V5 107 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 H0Y858 1186 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 MANBAO00462 879 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 PER2O15055 1255 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 LSM1O15116 133 aaKnown RBP13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 GPR39O43194 453 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 LEFTY1O75610 366 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 RFPL2O75678 378 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 TIMP2P16035 220 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 SLC6A2P23975 617 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 CCR7P32248 378 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 AQP4P55087 323 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 UFM1P61960 85 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 ELP6Q0PNE2 266 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 RALGDSQ12967 914 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 PWP1Q13610 501 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 GBX1Q14549 363 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 DHCR24Q15392 516 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 SYTL3Q4VX76 610 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 FBXO48Q5FWF7 155 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 ARSIQ5FYB1 569 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 TCEAL5Q5H9L2 206 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 RNF111Q6ZNA4 994 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 GRASPQ7Z6J2 395 aaPredicted RBP13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 PTRH1Q86Y79 214 aaKnown RBP13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 SPNS2Q8IVW8 549 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 FRS2Q8WU20 508 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 ASB11Q8WXH4 323 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 PPWD1Q96BP3 646 aaKnown RBP13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 PPP1R16AQ96I34 528 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 PKP2Q99959 881 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 TMEM79Q9BSE2 394 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 DPY30Q9C005 99 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 PCDHAC1Q9H158 963 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 IL1RL2Q9HB29 575 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 LRTM1Q9HBL6 345 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 SLC52A3Q9NQ40 469 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 CCM2LQ9NUG4 571 aaPredicted RBP13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 DNAJC11Q9NVH1 559 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 THG1LQ9NWX6 298 aaKnown RBP13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 C1orf109Q9NX04 203 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 ELOVL2Q9NXB9 296 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 KLQ9UEF7 1012 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 GIMAP2Q9UG22 337 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 MAGEL2Q9UJ55 1249 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 TSR3Q9UJK0 312 aaKnown RBP13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 ZNF490Q9ULM2 529 aaPredicted RBP13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 PCDHA9Q9Y5H5 950 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 WNT6Q9Y6F9 365 aa13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 ZNF106Q9H2Y7 1883 aaKnown RBP13.19□□□□□ -0.3
SSR4P1-201ENST00000415143 TPRP12270 2363 aaKnown RBP13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 DHRS12A0PJE2 317 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 PRR23AA6NEV1 266 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 NME4O00746 187 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 UGDHO60701 494 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 ATG13O75143 517 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 SEC22BO75396 215 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 KCNH1O95259 989 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 CATP04040 527 aaKnown RBP13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 PIM1P11309 404 aaPredicted RBP13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 ACPPP15309 386 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 EPCAMP16422 314 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 FASP25445 335 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 HTR1EP28566 365 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 MSX2P35548 267 aaPredicted RBP13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 CHN2P52757 468 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 PLOD1Q02809 727 aaPredicted RBP13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 LIPEQ05469 1076 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 HSPA14Q0VDF9 509 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 ABRAXAS2Q15018 415 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 EIF4HQ15056 248 aaKnown RBP13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 PDK3Q15120 406 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 TLR1Q15399 786 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 PHKG1Q16816 387 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 SCIMPQ6UWF3 145 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 MARVELD2Q8N4S9 558 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 ANKFN1Q8N957 763 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 TMEM102Q8N9M5 508 aaPredicted RBP13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 FAM156AQ8NDB6 213 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 TMIEQ8NEW7 156 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 OR8J3Q8NGG0 315 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 OR2T11Q8NH01 316 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 PROKR1Q8TCW9 393 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 UCMAQ8WVF2 138 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms