RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 LRRC56Q8IYG6 542 aaPredicted RBP12.93□□□□□ -0.34
CNN3-203ENST00000415017 MINDY1Q8N5J2 469 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 FAM181AQ8N9Y4 354 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 FAM46DQ8NEK8 389 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 OR5AR1Q8NGP9 310 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 OR4C6Q8NH72 309 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 HMGCLL1Q8TB92 370 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 SLC37A2Q8TED4 501 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 PATE1Q8WXA2 126 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 RAD51AP1Q96B01 352 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 C12orf66Q96MD2 445 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 CAMK1GQ96NX5 476 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 C1QTNF3Q9BXJ4 246 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 UNKQ9C0B0 810 aaKnown RBP12.93□□□□□ -0.34
CNN3-203ENST00000415017 KIR3DX1Q9H7L2 352 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 PARD6AQ9NPB6 346 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 POT1Q9NUX5 634 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 POLG2Q9UHN1 485 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 PTBP2Q9UKA9 531 aaKnown RBP12.93□□□□□ -0.34
CNN3-203ENST00000415017 GMEB2Q9UKD1 530 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 TMCO1Q9UM00 188 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 HEBP2Q9Y5Z4 205 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 U3KQA8 63 aa12.93□□□□□ -0.34
CNN3-203ENST00000415017 ASXL3Q9C0F0 2248 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 SYCE1LA8MT33 242 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 PDZK1P1A8MUH7 402 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 SNX2O60749 519 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 SDC3O75056 442 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 CATP04040 527 aaKnown RBP12.92□□□□□ -0.34
CNN3-203ENST00000415017 RPN2P04844 631 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 RPIAP49247 311 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 SLC14A1Q13336 389 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 PCLAFQ15004 111 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 SEPT7Q16181 437 aaKnown RBP12.92□□□□□ -0.34
CNN3-203ENST00000415017 HSP90B2PQ58FF3 399 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 METTL2BQ6P1Q9 378 aaKnown RBP12.92□□□□□ -0.34
CNN3-203ENST00000415017 ZYG11AQ6WRX3 759 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 GPSM1Q86YR5 675 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 AVL9Q8NBF6 648 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 PHC3Q8NDX5 983 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 OR2I1PQ8NGU4 316 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 MCOLN3Q8TDD5 553 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 ZDHHC1Q8WTX9 485 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 RHBDF1Q96CC6 855 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 CCDC138Q96M89 665 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 TSNARE1Q96NA8 513 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 FOPNLQ96NB1 174 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 FAM111AQ96PZ2 611 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 TRIT1Q9H3H1 467 aaKnown RBP12.92□□□□□ -0.34
CNN3-203ENST00000415017 SEMA4GQ9NTN9 838 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 FAM86C1Q9NVL1 165 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 NUDT4Q9NZJ9 180 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 COPG2Q9UBF2 871 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 RNF112Q9ULX5 631 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 ASF1AQ9Y294 204 aa12.92□□□□□ -0.34
CNN3-203ENST00000415017 ZFHX2Q9C0A1 2572 aaPredicted RBP12.92□□□□□ -0.34
CNN3-203ENST00000415017 RP1P56715 2156 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 PRAMEF33A0A0G2JMD5 474 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 STX16-NPEPL1H3BU86 382 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 TRIM38O00635 465 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 STX16O14662 325 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 BIRC5O15392 142 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 TAPBPO15533 448 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 FFAR2O15552 330 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 DLX3O60479 287 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 FOXD2O60548 495 aaPredicted RBP12.91□□□□□ -0.34
CNN3-203ENST00000415017 NR1D1P20393 614 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 CYP2A7P20853 494 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 ATP5F1P24539 256 aaPredicted RBP12.91□□□□□ -0.34
CNN3-203ENST00000415017 SLC6A12P48065 614 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 HNMTP50135 292 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 DNAJB13P59910 316 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 ARHGAP19Q14CB8 494 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 SF3A2Q15428 464 aaKnown RBP12.91□□□□□ -0.34
CNN3-203ENST00000415017 CYP2A13Q16696 494 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 DEFB133Q30KQ1 61 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 C14orf28Q4W4Y0 310 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 ZCCHC8Q6NZY4 707 aaKnown RBP12.91□□□□□ -0.34
CNN3-203ENST00000415017 DUS1LQ6P1R4 473 aaKnown RBP12.91□□□□□ -0.34
CNN3-203ENST00000415017 ARL14Q8N4G2 192 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 ARMC2Q8NEN0 867 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 OR9A1PQ8NGU1 263 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 MAGEC3Q8TD91 643 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 UBTD2Q8WUN7 234 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 FBXL8Q96CD0 374 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 PKP4Q99569 1192 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 DUSP23Q9BVJ7 150 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 CNOT10Q9H9A5 744 aaKnown RBP12.91□□□□□ -0.34
CNN3-203ENST00000415017 IMP3Q9NV31 184 aaKnown RBP12.91□□□□□ -0.34
CNN3-203ENST00000415017 OXSMQ9NWU1 459 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 SPATA7Q9P0W8 599 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 SIRPGQ9P1W8 387 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 CPSF2Q9P2I0 782 aaKnown RBP12.91□□□□□ -0.34
CNN3-203ENST00000415017 CPNE7Q9UBL6 633 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 HCN4Q9Y3Q4 1203 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 CFAP20Q9Y6A4 193 aaKnown RBP12.91□□□□□ -0.34
CNN3-203ENST00000415017 COLEC10Q9Y6Z7 277 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 HEATR5BQ9P2D3 2071 aa12.91□□□□□ -0.34
CNN3-203ENST00000415017 RIF1Q5UIP0 2472 aaKnown RBP12.91□□□□□ -0.34
CNN3-203ENST00000415017 COL27A1Q8IZC6 1860 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms