RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ARSFP54793 590 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 EMP3P54852 163 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 ARL4CP56559 192 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 RPS15P62841 145 aaKnown RBP6.2□□□□□ -1.42
USP54-202ENST00000413442 CXADRP78310 365 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 FOXM1Q08050 763 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 HSPA14Q0VDF9 509 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 GBX1Q14549 363 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 FAM214AQ32MH5 1076 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 TCTE1Q5JU00 501 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 SNAP47Q5SQN1 464 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 ANKS6Q68DC2 871 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 TLDC1Q6P9B6 456 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 RASGRP3Q8IV61 690 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 GPR135Q8IZ08 494 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 ADGRF3Q8IZF5 1079 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 TAB3Q8N5C8 712 aaPredicted RBP6.2□□□□□ -1.42
USP54-202ENST00000413442 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.2□□□□□ -1.42
USP54-202ENST00000413442 OR52E1Q8NGJ3 308 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 OR2L8Q8NGY9 312 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 LPGAT1Q92604 370 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 INPP5DQ92835 1189 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 SNF8Q96H20 258 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 VPS50Q96JG6 964 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 RMDN2Q96LZ7 410 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 BIRC8Q96P09 236 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 OR6C1Q96RD1 312 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 MAP3K3Q99759 626 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 DHRS4Q9BTZ2 278 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 RAB17Q9H0T7 212 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 FGF21Q9NSA1 209 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 SYBUQ9NX95 663 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 TAS2R13Q9NYV9 303 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 WHRNQ9P202 907 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 ANKMY1Q9P2S6 941 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 SLC2A6Q9UGQ3 507 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 FBXO5Q9UKT4 447 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 SLC39A10Q9ULF5 831 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 SRPK3Q9UPE1 567 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 CDYLQ9Y232 598 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 DHRS7Q9Y394 339 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 MAD1L1Q9Y6D9 718 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 CHD8Q9HCK8 2581 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 CACNA1BQ00975 2339 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 CEP295Q9C0D2 2601 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 IGHV5-51A0A0C4DH38 117 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 SLC9B1P1A6NJY1 282 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 GFYI3L273 518 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 RASGRF2O14827 1237 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 PCDH17O14917 1159 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 SLC16A5O15375 505 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 GPR39O43194 453 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 OR1I1O60431 355 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 CPNE3O75131 537 aaKnown RBP6.19□□□□□ -1.42
USP54-202ENST00000413442 VPS26AO75436 327 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 CCNDBP1O95273 360 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 C1orf105O95561 183 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 DLGAP3O95886 979 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 ONECUT2O95948 504 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 CATP04040 527 aaKnown RBP6.19□□□□□ -1.42
USP54-202ENST00000413442 HGFP14210 728 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 POLR2CP19387 275 aaPredicted RBP6.19□□□□□ -1.42
USP54-202ENST00000413442 AGXTP21549 392 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 CCND1P24385 295 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 OAS2P29728 719 aaKnown RBP6.19□□□□□ -1.42
USP54-202ENST00000413442 STAT5AP42229 794 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 PREPP48147 710 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 KPNA2P52292 529 aaKnown RBP6.19□□□□□ -1.42
USP54-202ENST00000413442 GFERP55789 205 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 ABATP80404 500 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 CKAP4Q07065 602 aaKnown RBP6.19□□□□□ -1.42
USP54-202ENST00000413442 C19orf57Q0VDD7 668 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 TUBB3Q13509 450 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 SEMA3AQ14563 771 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 HIF1AQ16665 826 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 FAM182AQ5T1J6 154 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 IZUMO3Q5VZ72 239 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 HIBCHQ6NVY1 386 aaPredicted RBP6.19□□□□□ -1.42
USP54-202ENST00000413442 C19orf48Q6RUI8 117 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 SPESP1Q6UW49 350 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 ZNF517Q6ZMY9 492 aaPredicted RBP6.19□□□□□ -1.42
USP54-202ENST00000413442 UNC5AQ6ZN44 842 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 FAM92BQ6ZTR7 304 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 CENPUQ71F23 418 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 ZNF572Q7Z3I7 529 aaPredicted RBP6.19□□□□□ -1.42
USP54-202ENST00000413442 SLC26A11Q86WA9 606 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 ZFAND4Q86XD8 727 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 ZNF761Q86XN6 746 aaPredicted RBP6.19□□□□□ -1.42
USP54-202ENST00000413442 HPS6Q86YV9 775 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 CNTN4Q8IWV2 1026 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 PALM2Q8IXS6 379 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 OTUD6BQ8N6M0 293 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 LMNTD1Q8N9Z9 388 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 SPATA4Q8NEY3 305 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 PROKR1Q8TCW9 393 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 MCOLN3Q8TDD5 553 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 THAP4Q8WY91 577 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 RSC1A1Q92681 617 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 DLG3Q92796 817 aa6.19□□□□□ -1.42
USP54-202ENST00000413442 N4BP2L2Q92802 583 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms