RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 GCNT3O95395 438 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ZDHHC11BP0C7U3 371 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 SPI1P17947 270 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 MCM7P33993 719 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PCGF2P35227 344 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 KCNK10P57789 538 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 KCNH2Q12809 1159 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ILKQ13418 452 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 INPP5AQ14642 412 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 TMEM35AQ53FP2 167 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 KLHL12Q53G59 568 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PIGGQ5H8A4 983 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 CLLU1Q5K131 121 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ANKS6Q68DC2 871 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 KDM4DQ6B0I6 523 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ARMC6Q6NXE6 501 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 TEX261Q6UWH6 196 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 C17orf107Q6ZR85 190 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PRSS48Q7RTY5 328 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 SLC51AQ86UW1 340 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 TGIF2LXQ8IUE1 241 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PSTKQ8IV42 348 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 KRT78Q8N1N4 520 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 LRRC18Q8N456 261 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ZNF557Q8N988 423 aaPredicted RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 TDRD5Q8NAT2 981 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 TRPV1Q8NER1 839 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 DMBX1Q8NFW5 382 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PHF10Q8WUB8 498 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 TMEM174Q8WUU8 243 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 OR1F2PQ96R84 312 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 SPSB2Q99619 263 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 TRIM56Q9BRZ2 755 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 ACSS3Q9H6R3 686 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PAK1IP1Q9NWT1 392 aaPredicted RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 MAP10Q9P2G4 905 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 NDRG3Q9UGV2 375 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 FKBP7Q9Y680 259 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 U3KQ87 197 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 RGPD3A6NKT7 1758 aaPredicted RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 RGPD4Q7Z3J3 1758 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 FAM237BA0A1B0GVD1 139 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 A0A1W2PPM1 405 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 OR6C70A6NIJ9 312 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 MPTX1A8MV57 137 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 CASC3O15234 703 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 TXNL1O43396 289 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ODC1P11926 461 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 IL12AP29459 219 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 CDH8P55286 799 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 NOMO3P69849 1222 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 NOMO1Q15155 1222 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 RBMS2Q15434 407 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 CTF1Q16619 201 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 NRF1Q16656 503 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 SLC36A3Q495N2 470 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 FAXCQ5TGI0 409 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 XAF1Q6GPH4 301 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 GPR153Q6NV75 609 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 FRMD7Q6ZUT3 714 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 USP17L1Q7RTZ2 530 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 GPR155Q7Z3F1 870 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 NECAB2Q7Z6G3 386 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 BLIDQ8IZY5 108 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PYROXD2Q8N2H3 581 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 C9orf62Q8N4C0 152 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 KBTBD8Q8NFY9 601 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 OR9A2Q8NGT5 310 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ELP5Q8TE02 316 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 CCDC124Q96CT7 223 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 LRIG1Q96JA1 1093 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 NECTIN4Q96NY8 510 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 TEFMQ96QE5 360 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 CCNL2Q96S94 520 aaPredicted RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 PHOX2BQ99453 314 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ALOXE3Q9BYJ1 711 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ANO3Q9BYT9 981 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 ANKRD19PQ9H560 264 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 COPS7BQ9H9Q2 264 aaPredicted RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 ITM2CQ9NQX7 267 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 CATSPERZQ9NTU4 200 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 TBC1D13Q9NVG8 400 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 SPHK1Q9NYA1 384 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 TAS2R9Q9NYW1 312 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 MAD2L2Q9UI95 211 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 PURGQ9UJV8 347 aaKnown RBP5.14□□□□□ -1.59
HERC4-205ENST00000412272 SHOC2Q9UQ13 582 aa5.14□□□□□ -1.59
HERC4-205ENST00000412272 TMEM2Q9UHN6 1383 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 TCP10L2B9ZVM9 353 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 H0YAE9 185 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 IRAK2O43187 625 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 SELENOFO60613 162 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 OR1E1P30953 314 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 MAT2AP31153 395 aaKnown RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 MPIP34949 423 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 EPHB1P54762 984 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 SLAMF1Q13291 335 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 ASAH1Q13510 395 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 USP10Q14694 798 aaKnown RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 POU4F3Q15319 338 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms