RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 CPSF6Q16630 551 aaKnown RBP eCLIP23.96■■□□□ 1.43
VRK2-202ENST00000412104 AAK1Q2M2I8 961 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 GGTA1PQ4G0N0 100 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 FNDC3BQ53EP0 1204 aaKnown RBP23.96■■□□□ 1.43
VRK2-202ENST00000412104 IRAK1BP1Q5VVH5 260 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 RASGEF1AQ8N9B8 481 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 MCOLN3Q8TDD5 553 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 NUDT8Q8WV74 236 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 PYCR2Q96C36 320 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 WRAP53Q9BUR4 548 aaKnown RBP23.96■■□□□ 1.43
VRK2-202ENST00000412104 LRTM1Q9HBL6 345 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 ACTR3BQ9P1U1 418 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 FAM8A1Q9UBU6 413 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 AQP12BA6NM10 295 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 SPINT1O43278 529 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 TSPAN6O43657 245 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 KRT6AP02538 564 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 KRT6BP04259 564 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 VARSP26640 1264 aaKnown RBP23.96■■□□□ 1.43
VRK2-202ENST00000412104 KRT6CP48668 564 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 CTSCP53634 463 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 FOLH1Q04609 750 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 PTGR1Q14914 329 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 NEK5Q6P3R8 708 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 RASGRP3Q8IV61 690 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 AQP12AQ8IXF9 295 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 NRSN1Q8IZ57 195 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 SMARCD2Q92925 531 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 UHRF1Q96T88 793 aaPredicted RBP23.96■■□□□ 1.43
VRK2-202ENST00000412104 FAM83CQ9BQN1 747 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 EFHD1Q9BUP0 239 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 YY1AP1Q9H869 796 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 ZFP14Q9HCL3 533 aa23.96■■□□□ 1.43
VRK2-202ENST00000412104 DPPA5A6NC42 116 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 PSMD11O00231 422 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 ARNTLO00327 626 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 IFRD1O00458 451 aaPredicted RBP23.95■■□□□ 1.42
VRK2-202ENST00000412104 WNT9AO14904 365 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 ARPC2O15144 300 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 GSTM1P09488 218 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 NRIP1P48552 1158 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 ERVK-21P61565 698 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 GSTM4Q03013 218 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 LIPEQ05469 1076 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 SLC44A4Q53GD3 710 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 NANOGP8Q6NSW7 305 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 FBXL19Q6PCT2 694 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 SPPL2CQ8IUH8 684 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 ST13P5Q8NFI4 369 aaPredicted RBP23.95■■□□□ 1.42
VRK2-202ENST00000412104 CANT1Q8WVQ1 401 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 TMEM74Q96NL1 305 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 SAMD11Q96NU1 681 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 SEMA6AQ9H2E6 1030 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 NANOGQ9H9S0 305 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 CERS4Q9HA82 394 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 ASIC5Q9NY37 505 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 DEC1Q9P2X7 70 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 ZFC3H1O60293 1989 aaKnown RBP23.95■■□□□ 1.42
VRK2-202ENST00000412104 LRRK1Q38SD2 2015 aa23.95■■□□□ 1.42
VRK2-202ENST00000412104 KCNE1BA0A087WTH5 132 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 C15orf38-AP3S2A0A0A6YYH1 394 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 TXNDC9O14530 226 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 SEC22BO75396 215 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 PDYNP01213 254 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 DGKQP52824 942 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 EEFSECP57772 596 aaKnown RBP23.94■■□□□ 1.42
VRK2-202ENST00000412104 KIAA0040Q15053 153 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 DUSP6Q16828 381 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 HNRNPA1L2Q32P51 320 aaKnown RBP23.94■■□□□ 1.42
VRK2-202ENST00000412104 SYTL3Q4VX76 610 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 C9orf64Q5T6V5 341 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 ARPINQ7Z6K5 226 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 LIX1Q8N485 282 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 VN1R2Q8NFZ6 395 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 FGF13Q92913 245 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 MTFMTQ96DP5 389 aaKnown RBP23.94■■□□□ 1.42
VRK2-202ENST00000412104 KCTD14Q9BQ13 255 aaPredicted RBP23.94■■□□□ 1.42
VRK2-202ENST00000412104 ACPTQ9BZG2 426 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 MUC13Q9H3R2 512 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 SFXN1Q9H9B4 322 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 SNX13Q9Y5W8 968 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 COL4A3Q01955 1670 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 PAPLNO95428 1278 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 ITGB7P26010 798 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 PRLHRP49683 370 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 C9orf50Q5SZB4 431 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 DLEU7Q6UYE1 221 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 IFNEQ86WN2 208 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 ARRDC3Q96B67 414 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 DTD2Q96FN9 168 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 COQ10AQ96MF6 247 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 DNAJC11Q9NVH1 559 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 ARMC1Q9NVT9 282 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 C1orf109Q9NX04 203 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 SLC22A14Q9Y267 594 aa23.94■■□□□ 1.42
VRK2-202ENST00000412104 KIAA1549LQ6ZVL6 1849 aa23.93■■□□□ 1.42
VRK2-202ENST00000412104 EDDM13A0A1B0GTR0 161 aa23.93■■□□□ 1.42
VRK2-202ENST00000412104 HEPACAM2A8MVW5 462 aa23.93■■□□□ 1.42
VRK2-202ENST00000412104 H0Y858 1186 aa23.93■■□□□ 1.42
VRK2-202ENST00000412104 INPP4BO15327 924 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms