RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 DCP1BQ8IZD4 617 aaKnown RBP3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 B4GALNT2Q8NHY0 566 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 LNX1Q8TBB1 728 aaPredicted RBP3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 RNF128Q8TEB7 428 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 CCDC107Q8WV48 283 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 RAD54LQ92698 747 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 BICD1Q96G01 975 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 OXNAD1Q96HP4 312 aaPredicted RBP3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 ADGRG7Q96K78 797 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 SPATA33Q96N06 139 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 VN1R1Q9GZP7 353 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 ARRDC1-AS1Q9H2J1 176 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 LMAN1LQ9HAT1 526 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 CDH20Q9HBT6 801 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 Q9N2K0 584 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 SERINC1Q9NRX5 453 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 LRWD1Q9UFC0 647 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 ARMCX3Q9UH62 379 aaPredicted RBP3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 KCNS2Q9ULS6 477 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 KCNK7Q9Y2U2 307 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 SNX5Q9Y5X3 404 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 CGNL1Q0VF96 1302 aa3.85□□□□□ -1.79
RNU2-28P-201ENST00000410457 MAGEA13PA6NCF6 341 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 C4orf47A7E2U8 309 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 FAM86B1E9PN63 330 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 LIPFP07098 398 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 INHBAP08476 426 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 FAM86B2P0C5J1 330 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 TCF4P15884 667 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 PTGER4P35408 488 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 UBASH3AP57075 661 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 EEF1A2Q05639 463 aaKnown RBP3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 KIF5AQ12840 1032 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 PRKAA1Q13131 559 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 MFAP5Q13361 173 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 DUOXA1Q1HG43 343 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 SYT14P1Q58G82 188 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 TCTE1Q5JU00 501 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 GLRA4Q5JXX5 417 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 TXNRD3NBQ6F5E7 133 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 CREB3L2Q70SY1 520 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 NUP54Q7Z3B4 507 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 HOOK3Q86VS8 718 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 LONP2Q86WA8 852 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 NUDT13Q86X67 352 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 DZIP1Q86YF9 867 aaKnown RBP3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 FAM219AQ8IW50 185 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 C4orf19Q8IY42 314 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 TRIML1Q8N9V2 468 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 NHLRC2Q8NBF2 726 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 HEXDCQ8WVB3 486 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 NSMAFQ92636 917 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 SGK494Q96LW2 274 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 TMEM204Q9BSN7 226 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 CSTL1Q9H114 145 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 TUFT1Q9NNX1 390 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 IL1RAPL2Q9NP60 686 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 ABCB8Q9NUT2 735 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 ADPRHL2Q9NX46 363 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 B3GAT1Q9P2W7 334 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 ITGA11Q9UKX5 1188 aa3.84□□□□□ -1.79
RNU2-28P-201ENST00000410457 HNRNPCL2B2RXH8 293 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 LUC7L3O95232 432 aaKnown RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 KRT19P08727 400 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 ACAA1P09110 424 aaPredicted RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 HAPLN1P10915 354 aaPredicted RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 EEF2P13639 858 aaKnown RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 CBLP22681 906 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 AZGP1P25311 298 aaKnown RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 SOAT1P35610 550 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 WNT5AP41221 380 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 HNF4AP41235 474 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 ALDH3A2P51648 485 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 PTENP60484 403 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 GAGE5Q13069 117 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 GAGE6Q13070 117 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZBTB17Q13105 803 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 SF3B4Q15427 424 aaKnown RBP eCLIP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 NPTX1Q15818 432 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 SMU1Q2TAY7 513 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 ASPRV1Q53RT3 343 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 ELFN2Q5R3F8 820 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 PLBD1Q6P4A8 553 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 FAM171BQ6P995 826 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF449Q6P9G9 518 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 RAPH1Q70E73 1250 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 TUSC5Q8IXB3 177 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 KLHL7Q8IXQ5 586 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 SYCP3Q8IZU3 236 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 ARHGAP24Q8N264 748 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 RYBPQ8N488 228 aaPredicted RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 C10orf53Q8N6V4 93 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF441Q8N8Z8 693 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 OR7G3Q8NG95 312 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 LILRB1Q8NHL6 650 aaPredicted RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 CTCFLQ8NI51 663 aaPredicted RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 SMG7Q92540 1137 aaKnown RBP3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 RTP4Q96DX8 246 aa3.83□□□□□ -1.8
RNU2-28P-201ENST00000410457 LINGO1Q96FE5 620 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms