RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 MEGF11A6BM72 1044 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 YJEFN3A6XGL0 299 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 E5RJQ4 531 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 J3KTA2 159 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 M0QX08 132 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 M0R296 226 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ACOT7O00154 380 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 CTDSP2O14595 271 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 XPO1O14980 1071 aaKnown RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SLC22A1O15245 554 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 NVLO15381 856 aaKnown RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 BCAT2O15382 392 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 KCNJ13O60928 360 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 HSF2BPO75031 334 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 PEX11AO75192 247 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 TULP3O75386 442 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ECI2O75521 394 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SEC24DO94855 1032 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ALX3O95076 343 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 UNC5CO95185 931 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 OXSR1O95747 527 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 OAS1P00973 400 aaKnown RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SERPINC1P01008 464 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 AMY1AP04745 511 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 HMBSP08397 361 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ZDHHC11BP0C7U3 371 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 TPBGLP0DKB5 382 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 MBL2P11226 248 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SRFP11831 508 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SELLP14151 372 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 CCNB1P14635 433 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ARSAP15289 507 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 CYP11B1P15538 503 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 TMEM11P17152 192 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 PSMC3P17980 439 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 CCNA2P20248 432 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 RAB6AP20340 208 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 CD72P21854 359 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 DDX6P26196 483 aaKnown RBP eCLIP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 PCK1P35558 622 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 KIR3DL1P43629 444 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 RABIFP47224 123 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 PTDSS1P48651 473 aaKnown RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SLC11A2P49281 568 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 UCP3P55916 312 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 RPL7AP62424 266 aaKnown RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 NOMO3P69849 1222 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SIGLEC14Q08ET2 396 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 EFEMP1Q12805 493 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 RALGDSQ12967 914 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 BNIP1Q12981 228 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 MTF1Q14872 753 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 PCLAFQ15004 111 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ZNF77Q15935 545 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 INSCQ1MX18 579 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 C2CD6Q53TS8 623 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ZRANB3Q5FWF4 1079 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SPDYAQ5MJ70 313 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SFRP5Q5T4F7 317 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 MROH9Q5TGP6 573 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 STEAP3Q658P3 488 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 PLAG1Q6DJT9 500 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 DGAT2L7PQ6IED9 249 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 LCLAT1Q6UWP7 414 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ZDHHC24Q6UX98 284 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 Q6ZVL8 140 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 BHLHA9Q7RTU4 235 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SCD5Q86SK9 330 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 VPS36Q86VN1 386 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 MIB1Q86YT6 1006 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 FAM217AQ8IXS0 508 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 FAM71AQ8IYT1 594 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 CADM3Q8N126 398 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SIX6OS1Q8N1H7 587 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 CCDC197Q8NCU1 140 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 C2CD4AQ8NCU7 369 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ANGPTL6Q8NI99 470 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 NAT14Q8WUY8 206 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 DNAJC9Q8WXX5 260 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 EDAQ92838 391 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ELSPBP1Q96BH3 223 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 GRAMD1AQ96CP6 724 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ELP4Q96EB1 424 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 PIWIL1Q96J94 861 aaKnown RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 C1orf74Q96LT6 269 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 LENG8Q96PV6 779 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 PSMG3-AS1Q96PY0 264 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 PSKH2Q96QS6 385 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 ERGIC2Q96RQ1 377 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 PKP4Q99569 1192 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 CTRCQ99895 268 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 FAM118BQ9BPY3 351 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 UQCC2Q9BRT2 126 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 CENPKQ9BS16 269 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 TRMT61BQ9BVS5 477 aaKnown RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 SSBP4Q9BWG4 385 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 MS4A7Q9GZW8 240 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-202ENST00000409915 RAB17Q9H0T7 212 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 PCED1AQ9H1Q7 454 aa4.5□□□□□ -1.69
SF3B1-202ENST00000409915 STN1Q9H668 368 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms