RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 IGSF5Q9NSI5 407 aa20.07■□□□□ 0.8
C4orf48-202ENST00000409860 LAMA1P25391 3075 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 GOLGA6L10A6NI86 522 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 KLHL2O95198 593 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 ENO2P09104 434 aaPredicted RBP20.06■□□□□ 0.8
C4orf48-202ENST00000409860 COL6A2P12110 1019 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 GPR3P46089 330 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 NR1D2Q14995 579 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 TRIP6Q15654 476 aaKnown RBP20.06■□□□□ 0.8
C4orf48-202ENST00000409860 ZNF761Q86XN6 746 aaPredicted RBP20.06■□□□□ 0.8
C4orf48-202ENST00000409860 RASGRP3Q8IV61 690 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 CENPLQ8N0S6 344 aaPredicted RBP20.06■□□□□ 0.8
C4orf48-202ENST00000409860 RAB42Q8N4Z0 105 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 FBXO15Q8NCQ5 510 aaPredicted RBP20.06■□□□□ 0.8
C4orf48-202ENST00000409860 OR52E1Q8NGJ3 308 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 MCOLN3Q8TDD5 553 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 SLC12A9Q9BXP2 914 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 TRIM54Q9BYV2 358 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 UNKQ9C0B0 810 aaKnown RBP20.06■□□□□ 0.8
C4orf48-202ENST00000409860 CENPHQ9H3R5 247 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 PARVBQ9HBI1 364 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 KCNK4Q9NYG8 393 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 ADAMTS6Q9UKP5 1117 aa20.06■□□□□ 0.8
C4orf48-202ENST00000409860 NOVA2Q9UNW9 492 aaKnown RBP20.06■□□□□ 0.8
C4orf48-202ENST00000409860 COL5A1P20908 1838 aaPredicted RBP20.06■□□□□ 0.8
C4orf48-202ENST00000409860 A0A1W2PPM1 405 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 CDC7O00311 574 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 GP1BAP07359 652 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 HIST1H2AGP0C0S8 130 aaPredicted RBP20.05■□□□□ 0.8
C4orf48-202ENST00000409860 MYZAPP0CAP1 466 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 PYGBP11216 843 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 HIST1H2ADP20671 130 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 GMPRP36959 345 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 ACADVLP49748 655 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 KPNA2P52292 529 aaKnown RBP20.05■□□□□ 0.8
C4orf48-202ENST00000409860 EPHA4P54764 986 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 DLG1Q12959 904 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 TSNQ15631 228 aaKnown RBP20.05■□□□□ 0.8
C4orf48-202ENST00000409860 TSNAXIP1Q2TAA8 658 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.05■□□□□ 0.8
C4orf48-202ENST00000409860 FRA10AC1Q70Z53 315 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 LCN9Q8WX39 176 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 NXNL1Q96CM4 212 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 HIST1H2AHQ96KK5 128 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 HIST1H2AJQ99878 128 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 CCDC3Q9BQI4 270 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 H2AFJQ9BTM1 129 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 RAB11FIP5Q9BXF6 653 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 TFB2MQ9H5Q4 396 aaKnown RBP20.05■□□□□ 0.8
C4orf48-202ENST00000409860 VIPAS39Q9H9C1 493 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 IKZF3Q9UKT9 509 aa20.05■□□□□ 0.8
C4orf48-202ENST00000409860 CCDC189A1A4V9 331 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 GOLGA8RI6L899 631 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 MYO1CO00159 1063 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 TM4SF5O14894 197 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 SYF2O95926 243 aaKnown RBP20.04■□□□□ 0.8
C4orf48-202ENST00000409860 TFEBP19484 476 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 ALDH4A1P30038 563 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 SHMT2P34897 504 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 PPM1FP49593 454 aaPredicted RBP20.04■□□□□ 0.8
C4orf48-202ENST00000409860 ILKQ13418 452 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 RSPO4Q2I0M5 234 aaPredicted RBP20.04■□□□□ 0.8
C4orf48-202ENST00000409860 PERM1Q5SV97 790 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 KLHL35Q6PF15 583 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 SPRED1Q7Z699 444 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 GLRX5Q86SX6 157 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 CLEC14AQ86T13 490 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 TRABD2AQ86V40 505 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 LCA5Q86VQ0 697 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 Q8N9G6 341 aaPredicted RBP20.04■□□□□ 0.8
C4orf48-202ENST00000409860 OR9A1PQ8NGU1 263 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 OR10G6Q8NH81 332 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 JPH3Q8WXH2 748 aaPredicted RBP20.04■□□□□ 0.8
C4orf48-202ENST00000409860 KIAA1191Q96A73 305 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 RTKNQ9BST9 563 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 TBC1D10AQ9BXI6 508 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 STMN4Q9H169 189 aaPredicted RBP20.04■□□□□ 0.8
C4orf48-202ENST00000409860 SRMSQ9H3Y6 488 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 EPB41L1Q9H4G0 881 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 SPATA7Q9P0W8 599 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 PLAGL1Q9UM63 463 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 PDE10AQ9Y233 779 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 ZNF292O60281 2723 aa20.04■□□□□ 0.8
C4orf48-202ENST00000409860 GOLGA4Q13439 2230 aaKnown RBP20.04■□□□□ 0.8
C4orf48-202ENST00000409860 FAM221BA6H8Z2 402 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 RAB28P51157 221 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 AP1S2P56377 157 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 OR1D5P58170 312 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 GPLD1P80108 840 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 ACAP2Q15057 778 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 PHKG1Q16816 387 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 CCSMST1Q4G0I0 132 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 SBSNQ6UWP8 590 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 PLD6Q8N2A8 252 aaKnown RBP20.03■□□□□ 0.8
C4orf48-202ENST00000409860 STAG3L4Q8TBR4 150 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 DLG3Q92796 817 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 PGM2Q96G03 612 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 AHCYL2Q96HN2 611 aaKnown RBP20.03■□□□□ 0.8
C4orf48-202ENST00000409860 ALG9Q9H6U8 611 aa20.03■□□□□ 0.8
C4orf48-202ENST00000409860 SENP1Q9P0U3 644 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms