RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ASIC1P78348 528 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 BEX3Q00994 111 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 STK4Q13043 487 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ITGADQ13349 1161 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 EMC2Q15006 297 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 KIF19Q2TAC6 998 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ZCWPW2Q504Y3 356 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 WBP2NLQ6ICG8 309 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 LRRC8EQ6NSJ5 796 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 OTUD6AQ7L8S5 288 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 SLC46A3Q7Z3Q1 461 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 NOXA1Q86UR1 476 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 SFR1Q86XK3 245 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 CCDC65Q8IXS2 484 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ADSSL1Q8N142 457 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 MLKLQ8NB16 471 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 PCYOX1LQ8NBM8 494 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ZUFSPQ96AP4 578 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 SLC41A2Q96JW4 573 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 CEP170P1Q96L14 293 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 BBS4Q96RK4 519 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 FAM110AQ9BQ89 295 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 BPIFA3Q9BQP9 254 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 STRA6Q9BX79 667 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 FGFBP2Q9BYJ0 223 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 HSD3B7Q9H2F3 369 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 TSPY26PQ9H489 355 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ST6GALNAC4Q9H4F1 302 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 AZI2Q9H6S1 392 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ESRP2Q9H6T0 727 aaKnown RBP4.28□□□□□ -1.72
CLK1-203ENST00000409769 GAREM1Q9H706 876 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 DDX31Q9H8H2 851 aaKnown RBP4.28□□□□□ -1.72
CLK1-203ENST00000409769 C17orf75Q9HAS0 396 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 PARVGQ9HBI0 331 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 MKKSQ9NPJ1 570 aaPredicted RBP4.28□□□□□ -1.72
CLK1-203ENST00000409769 OLFML3Q9NRN5 406 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 NRBP2Q9NSY0 501 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 PANK4Q9NVE7 773 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 RMND1Q9NWS8 449 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 CISD1Q9NZ45 108 aaKnown RBP4.28□□□□□ -1.72
CLK1-203ENST00000409769 SLCO3A1Q9UIG8 710 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 ZNF215Q9UL58 517 aaPredicted RBP4.28□□□□□ -1.72
CLK1-203ENST00000409769 ARHGAP26Q9UNA1 814 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 NFS1Q9Y697 457 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 STON1Q9Y6Q2 735 aa4.28□□□□□ -1.72
CLK1-203ENST00000409769 TRIP11Q15643 1979 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 UBE4BO95155 1302 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 ADGRA3Q8IWK6 1321 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 ANK1P16157 1881 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 MBLAC1A4D2B0 266 aaPredicted RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 LRRC53A6NM62 1247 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 EIF3DO15371 548 aaKnown RBP eCLIP4.27□□□□□ -1.73
CLK1-203ENST00000409769 SEC14L5O43304 696 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 TBCAO75347 108 aaKnown RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 PGK1P00558 417 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 PLGP00747 810 aaPredicted RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 HSPA1AP0DMV8 641 aaKnown RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 HSPA1BP0DMV9 641 aaKnown RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 MAOAP21397 527 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 GLRA2P23416 452 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 MARK3P27448 753 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 HOXD13P35453 343 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 PIGAP37287 484 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 PPP1R2P41236 205 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 PRCPP42785 496 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 PEX5P50542 639 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 LBX1P52954 281 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 HILS1P60008 231 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 POU5F1BQ06416 359 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 DRP2Q13474 957 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 EFNB3Q15768 340 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 AMZ1Q400G9 498 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 MARCH8Q5T0T0 291 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 ANKRD54Q6NXT1 300 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 FAM122CQ6P4D5 195 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 ZNF720Q7Z2F6 126 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 TRMT1LQ7Z2T5 733 aaKnown RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 ZC3HC1Q86WB0 502 aaKnown RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 TMPRSS12Q86WS5 348 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 ZC3H3Q8IXZ2 948 aaKnown RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 GUF1Q8N442 669 aaKnown RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 ZCCHC9Q8N567 271 aaKnown RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 MAGEC3Q8TD91 643 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 SCFD1Q8WVM8 642 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 TMED6Q8WW62 240 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 KIFAP3Q92845 792 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 ERGIC1Q969X5 290 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 CCDC47Q96A33 483 aaKnown RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 ZNF570Q96NI8 536 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 SH3GL2Q99962 352 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 NUF2Q9BZD4 464 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 POLR3FQ9H1D9 316 aaPredicted RBP4.27□□□□□ -1.73
CLK1-203ENST00000409769 BPIFA1Q9NP55 256 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 ASAH2Q9NR71 780 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 EXOC1Q9NV70 894 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 CITO14578 2027 aa4.27□□□□□ -1.73
CLK1-203ENST00000409769 PDCD11Q14690 1871 aaKnown RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 CEP350Q5VT06 3117 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 GRIN2DO15399 1336 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 NRCAMQ92823 1304 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms