RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CYP4F3Q08477 520 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 GALNT1Q10472 559 aaPredicted RBP13.12□□□□□ -0.31
COL6A2-204ENST00000409416 DSC3Q14574 896 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 LCN8Q6JVE9 175 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 HACD2Q6Y1H2 254 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 RD3Q7Z3Z2 195 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 GPR180Q86V85 440 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 DOK4Q8TEW6 326 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 FAM120BQ96EK7 910 aaKnown RBP13.12□□□□□ -0.31
COL6A2-204ENST00000409416 FEM1AQ9BSK4 669 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 TRIM54Q9BYV2 358 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 PLGRKTQ9HBL7 147 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 AIG1Q9NVV5 245 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 PLAGL1Q9UM63 463 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 TRIOBPQ9H2D6 2365 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 WASH3PC4AMC7 463 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 TEX28O15482 410 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 RASAL1O95294 804 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 BMP10O95393 424 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 C8AP07357 584 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 UROSP10746 265 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 MYF6P23409 242 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 HTR7P34969 479 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 HNF1BP35680 557 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 ATP4BP51164 291 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 C21orf59P57076 290 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 TNK2Q07912 1038 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 ATP6AP1Q15904 470 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 AFMIDQ63HM1 303 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 ITIH5Q86UX2 942 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 TMEM25Q86YD3 366 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 ZC3H7AQ8IWR0 971 aaKnown RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 TBC1D21Q8IYX1 336 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 C8orf48Q96LL4 319 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 C1orf74Q96LT6 269 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 PKMYT1Q99640 499 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 CTPS2Q9NRF8 586 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 ASPDHA6ND91 283 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 H3BMQ9 156 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 DLGAP1O14490 977 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 KPNA5O15131 536 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 RAD51BO15315 384 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 COL6A1P12109 1028 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 ZNF24P17028 368 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 PSMD8P48556 350 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 RPIAP49247 311 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 CDH4P55283 916 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 IL5RAQ01344 420 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 MAPK11Q15759 364 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 SLC36A3Q495N2 470 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 FAM98BQ52LJ0 330 aaKnown RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 LRRC66Q68CR7 880 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 SUSD1Q6UWL2 747 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 UBE2R2Q712K3 238 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 ZDHHC13Q8IUH4 622 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 TMEM199Q8N511 208 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 SLC39A13Q96H72 371 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 COG8Q96MW5 612 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 C2orf49Q9BVC5 232 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 PCDHA9Q9Y5H5 950 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 DEAF1O75398 565 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 MLYCDO95822 493 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 YBEYP58557 167 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 ERVK-8P63133 956 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 TUBA4AP68366 448 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 BORAQ6PGQ7 559 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 SPATA19Q7Z5L4 167 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 NECAB2Q7Z6G3 386 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 PHYKPLQ8IUZ5 450 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 NKAPQ8N5F7 415 aaKnown RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 FAM86B1Q8N7N1 296 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 FUBP3Q96I24 572 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 PAWRQ96IZ0 340 aaKnown RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 NRTNQ99748 197 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 DPH2Q9BQC3 489 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 FAM126AQ9BYI3 521 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 PCTPQ9UKL6 214 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 TSC2P49815 1807 aa13.11□□□□□ -0.31
COL6A2-204ENST00000409416 NYNRINQ9P2P1 1898 aaKnown RBP13.11□□□□□ -0.31
COL6A2-204ENST00000409416 CST1P01037 141 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 FGF4P08620 206 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 TNFRSF1BP20333 461 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 POLR2IP36954 125 aaKnown RBP13.1□□□□□ -0.31
COL6A2-204ENST00000409416 HK3P52790 923 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 ITGADQ13349 1161 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 NAE1Q13564 534 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 INTS11Q5TA45 600 aaKnown RBP13.1□□□□□ -0.31
COL6A2-204ENST00000409416 ZCCHC8Q6NZY4 707 aaKnown RBP13.1□□□□□ -0.31
COL6A2-204ENST00000409416 DUS1LQ6P1R4 473 aaKnown RBP13.1□□□□□ -0.31
COL6A2-204ENST00000409416 CYP20A1Q6UW02 462 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 ENPP6Q6UWR7 440 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 ELMOD1Q8N336 334 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 DTWD1Q8N5C7 304 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 DERL2Q9GZP9 239 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 MAGEH1Q9H213 219 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 PIKFYVEQ9Y2I7 2098 aa13.1□□□□□ -0.31
COL6A2-204ENST00000409416 LCHNA4D1U4 455 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms