RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 TM9SF3Q9HD45 589 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 ASTN1O14525 1302 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 UGT2B10P36537 528 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 MASP1P48740 699 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 CRISP3P54108 245 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 MCCD1P59942 119 aaPredicted RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 CLCQ05315 142 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 FAM174BQ3ZCQ3 159 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 GALNT12Q8IXK2 581 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 LRTOMTQ8WZ04 291 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 RIOK2Q9BVS4 552 aaKnown RBP11.95□□□□□ -0.5
SHANK2-203ENST00000409161 MAF1Q9H063 256 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 LHCGRP22888 699 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 GNG2P59768 71 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 RDH12Q96NR8 316 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 TBC1D14Q9P2M4 693 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 SCN8AQ9UQD0 1980 aa11.95□□□□□ -0.5
SHANK2-203ENST00000409161 SDK1Q7Z5N4 2213 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ARL5CA6NH57 179 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ARL13AQ5H913 290 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ZBTB46Q86UZ6 589 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 OR5J2Q8NH18 312 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 GTPBP3Q969Y2 492 aaKnown RBP11.94□□□□□ -0.5
SHANK2-203ENST00000409161 AZIN2Q96A70 460 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 TSSK3Q96PN8 268 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 LPIN3Q9BQK8 851 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 C2orf71A6NGG8 1288 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ZSCAN5BA6NJL1 495 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ABCG1P45844 678 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 PGDP52209 483 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 SP140Q13342 867 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 WSCD1Q658N2 575 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 LRRC55Q6ZSA7 311 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 FAXDC2Q96IV6 333 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 BRINP2Q9C0B6 783 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ADARB2Q9NS39 739 aaKnown RBP11.94□□□□□ -0.5
SHANK2-203ENST00000409161 BORCS7-ASMTA0A0B4J1R7 106 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 GJA1P17302 382 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 CIR1Q86X95 450 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-203ENST00000409161 SLC37A3Q8NCC5 494 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 OR6K6Q8NGW6 343 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 SEC14L1Q92503 715 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 P2RY11Q96G91 374 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 TMPRSS4Q9NRS4 437 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 TAS2R14Q9NYV8 317 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ALPPP05187 535 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 PKMP14618 531 aaKnown RBP11.94□□□□□ -0.5
SHANK2-203ENST00000409161 AGTR1P30556 359 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 SEMA5AQ13591 1074 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 CDK10Q15131 360 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 UBAP2Q5T6F2 1119 aaKnown RBP11.94□□□□□ -0.5
SHANK2-203ENST00000409161 FKBP1CQ5VVH2 108 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ADH1AP07327 375 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 TSPAN8P19075 237 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 TLR1Q15399 786 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 DCDC5Q6ZRR9 648 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 SLC13A3Q8WWT9 602 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 KCNMB3Q9NPA1 279 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 FLRT1Q9NZU1 646 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 RPIAP49247 311 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 PUS10Q3MIT2 529 aaKnown RBP11.94□□□□□ -0.5
SHANK2-203ENST00000409161 RAP1GAP2Q684P5 730 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 SMARCD3Q6STE5 483 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 CYP2U1Q7Z449 544 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ZNF565Q8N9K5 539 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 OR14K1Q8NGZ2 314 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 RTFDC1Q9BY42 306 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-203ENST00000409161 BPIFA1Q9NP55 256 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 COPZ2Q9P299 210 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 CAPN14A8MX76 684 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 SLC19A2O60779 497 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 SCGB2A1O75556 95 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 HDCP19113 662 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 CTBP2P56545 445 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 HERVK_113P63132 956 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ERVK-8P63133 956 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ARFRP1Q13795 201 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 QPCTQ16769 361 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 SH3RF1Q7Z6J0 888 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 OR10A6Q8NH74 314 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 IRGQQ8WZA9 623 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ACO2Q99798 780 aaKnown RBP11.94□□□□□ -0.5
SHANK2-203ENST00000409161 ERVK-6Q9BXR3 956 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 SMURF1Q9HCE7 757 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 HHATLQ9HCP6 504 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 GTF2IRD1Q9UHL9 959 aa11.94□□□□□ -0.5
SHANK2-203ENST00000409161 CELF2O95319 508 aaKnown RBP11.93□□□□□ -0.5
SHANK2-203ENST00000409161 ITGB1P05556 798 aa11.93□□□□□ -0.5
SHANK2-203ENST00000409161 MPIP34949 423 aa11.93□□□□□ -0.5
SHANK2-203ENST00000409161 IDH3AP50213 366 aa11.93□□□□□ -0.5
SHANK2-203ENST00000409161 SEC23BQ15437 767 aa11.93□□□□□ -0.5
SHANK2-203ENST00000409161 SHQ1Q6PI26 577 aaKnown RBP11.93□□□□□ -0.5
SHANK2-203ENST00000409161 VSTM1Q6UX27 236 aa11.93□□□□□ -0.5
SHANK2-203ENST00000409161 ASB18Q6ZVZ8 466 aa11.93□□□□□ -0.5
SHANK2-203ENST00000409161 MOB2Q70IA6 237 aa11.93□□□□□ -0.5
SHANK2-203ENST00000409161 OR4C15Q8NGM1 316 aa11.93□□□□□ -0.5
SHANK2-203ENST00000409161 NECAB3Q96P71 396 aaPredicted RBP11.93□□□□□ -0.5
SHANK2-203ENST00000409161 C1orf21Q9H246 121 aa11.93□□□□□ -0.5
SHANK2-203ENST00000409161 TAS2R3Q9NYW6 316 aa11.93□□□□□ -0.5
SHANK2-203ENST00000409161 WASF3Q9UPY6 502 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms