RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 RPL10P27635 214 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 HMGCLP35914 325 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 MAPK9P45984 424 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 GPR3P46089 330 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 VAV2P52735 878 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 LIMK2P53671 638 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 DRG2P55039 364 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 HHEXQ03014 270 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 ITGA9Q13797 1035 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 SPARCL1Q14515 664 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 CHRNA6Q15825 494 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 SNAP47Q5SQN1 464 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 SIGIRRQ6IA17 410 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 TUBA3EQ6PEY2 450 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 GLT6D1Q7Z4J2 308 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 TRIML2Q8N7C3 387 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 SGCDQ92629 289 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 SEC16BQ96JE7 1060 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 UBL7Q96S82 380 aaPredicted RBP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 SLC38A3Q99624 504 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 RHOXF2Q9BQY4 288 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 FICDQ9BVA6 458 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 SEMA4CQ9C0C4 833 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 OSGEPL1Q9H4B0 414 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 OCIAD1Q9NX40 245 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 IL17CQ9P0M4 197 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 ARL5AQ9Y689 179 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 FLNCQ14315 2725 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 ZFC3H1O60293 1989 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 ARPC4-TTLL3A0A0A6YYG9 625 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 IQANK1A0A1B0GTG1 560 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 TCRBV7S2A1N4TA0A589 114 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 OR52A4PA6NMU1 304 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 A8MU76 341 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 BTNL10A8MVZ5 291 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 HACD1B0YJ81 288 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 TMX2-CTNND1H3BSU7 103 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 KCNN4O15554 427 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 F3P13726 295 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 NQO1P15559 274 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 TMED10P49755 219 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 CTSCP53634 463 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 EIF3EP60228 445 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 UBE2IP63279 158 aaKnown RBP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 ITIH4Q14624 930 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 GSTA3Q16772 222 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 INSCQ1MX18 579 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 BROXQ5VW32 411 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 FOXB2Q5VYV0 432 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 TTC23LQ6PF05 361 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 TAOK1Q7L7X3 1001 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 BEND7Q8N7W2 519 aaPredicted RBP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 GALNT6Q8NCL4 622 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 OR4D9Q8NGE8 314 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 STARD8Q92502 1023 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 ABTB1Q969K4 478 aaPredicted RBP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 FAM136AQ96C01 138 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 VPS50Q96JG6 964 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 CMKLR1Q99788 373 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 ZNF624Q9P2J8 865 aaPredicted RBP9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 CPNE7Q9UBL6 633 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 KLHL3Q9UH77 587 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 LRCH1Q9Y2L9 728 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 CAPN6Q9Y6Q1 641 aa9.48□□□□□ -0.89
NIF3L1-202ENST00000409020 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 CTAGE9A4FU28 777 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 FAM47E-STBD1D6RA91 191 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 K7ENP7 123 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 CCL22O00626 93 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 ATXN7O15265 892 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 NVLO15381 856 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 DDX3YO15523 660 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 MTSS1O43312 755 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 CDK14O94921 469 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 RBP3P10745 1247 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 ZNF7P17097 686 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 PTPN7P35236 360 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 ADRA1AP35348 466 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 SPAM1P38567 509 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 PPM1FP49593 454 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 GDF10P55107 478 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 GFERP55789 205 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 COPS2P61201 443 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 VAC14Q08AM6 782 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 KPNB1Q14974 876 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 KCTD19Q17RG1 926 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 PDPK2PQ6A1A2 396 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 INO80CQ6PI98 192 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 XKR5Q6UX68 686 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 FAM83HQ6ZRV2 1179 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 LRRTM4Q86VH4 590 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 TRAPPC5Q8IUR0 188 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 RASGEF1AQ8N9B8 481 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 AENQ8WTP8 325 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 GIMAP5Q96F15 307 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 VPS35Q96QK1 796 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 CTRCQ99895 268 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 AIFM2Q9BRQ8 373 aa9.47□□□□□ -0.89
NIF3L1-202ENST00000409020 SARS2Q9NP81 518 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms