RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 RTP4Q96DX8 246 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 MARK4Q96L34 752 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 QRFPRQ96P65 431 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 RIOK1Q9BRS2 568 aaKnown RBP4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 TEX12Q9BXU0 123 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMEM39BQ9GZU3 492 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 LSG1Q9H089 658 aaKnown RBP4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 DNAJB4Q9UDY4 337 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 AMDHD2Q9Y303 409 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 OR2W1Q9Y3N9 320 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 PCDHGA5Q9Y5G8 931 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 MAGED1Q9Y5V3 778 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 GPR75-ASB3A0A0A6YYF3 556 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 A0A1W2PP11 408 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 C4orf47A7E2U8 309 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMEM189-UBE2V1I3L0A0 370 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 J3QR06 171 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 PSMD14O00487 310 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 SH2B2O14492 632 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 P4HA2O15460 535 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 ADRB2P07550 413 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 HSPD1P10809 573 aaKnown RBP4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 HLA-DOBP13765 273 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 PRLRP16471 622 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 HSPA4P34932 840 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 KRT20P35900 424 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 NT5C2P49902 561 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 CD81P60033 236 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 RUNX1T1Q06455 604 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 CXCL9Q07325 125 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 UBE2V1Q13404 147 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 NECTIN1Q15223 517 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 MEP1AQ16819 746 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 SYT16Q17RD7 645 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 MFSD4BQ5TF39 518 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 C9orf57Q5W0N0 161 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 NADSYN1Q6IA69 706 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZNF589Q86UQ0 364 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMPRSS12Q86WS5 348 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 EPHX4Q8IUS5 362 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 PM20D2Q8IYS1 436 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 OR8H2Q8N162 312 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 RBMXL3Q8N7X1 1067 aaKnown RBP4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 SLC38A9Q8NBW4 561 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 LMO3Q8TAP4 145 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 PIGTQ969N2 578 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 TEKT1Q969V4 418 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 MOAP1Q96BY2 351 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 BICD1Q96G01 975 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 SLF1Q9BQI6 1058 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 HGH1Q9BTY7 390 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 KIFC3Q9BVG8 833 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 CRNKL1Q9BZJ0 848 aaKnown RBP4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 KLHL4Q9C0H6 718 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 RAD21L1Q9H4I0 556 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 GIMAP4Q9NUV9 329 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMEM30AQ9NV96 361 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 KLHL9Q9P2J3 617 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 CTNNA3Q9UI47 895 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 MYH6P13533 1939 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 SRCAPQ6ZRS2 3230 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 SIPA1L1O43166 1804 aa4.81□□□□□ -1.64
HMGB3P19-201ENST00000403971 MYH4Q9Y623 1939 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 PROB1E7EW31 1015 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 AVILO75366 819 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 GH2P01242 217 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 NR2F1P10589 423 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 NMBRP28336 390 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 PRELPP51888 382 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 STAT2P52630 851 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 ART1P52961 327 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZBTB17Q13105 803 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 KEAP1Q14145 624 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 FKBP1CQ5VVH2 108 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZNF324BQ6AW86 544 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 FAM122CQ6P4D5 195 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 ADGRA1Q86SQ6 560 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 GALNT13Q8IUC8 556 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 MCEMP1Q8IX19 187 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 RNF113BQ8IZP6 322 aaKnown RBP4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 LSMEM1Q8N8F7 131 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 APPL2Q8NEU8 664 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 THAP6Q8TBB0 222 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 PRPF31Q8WWY3 499 aaKnown RBP4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 FIG4Q92562 907 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 CCDC34Q96HJ3 373 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZNF385AQ96PM9 386 aaKnown RBP4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 GCNAQ96QF7 691 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 NACAP1Q9BZK3 213 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 PPIL3Q9H2H8 161 aaKnown RBP4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 CD93Q9NPY3 652 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 TAS2R14Q9NYV8 317 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 NRBP1Q9UHY1 535 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 VDAC3Q9Y277 283 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMEM184BQ9Y519 407 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 COL2A1P02458 1487 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 WDR90Q96KV7 1748 aa4.8□□□□□ -1.64
HMGB3P19-201ENST00000403971 GREB1LQ9C091 1923 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms