RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 AKT1P31749 480 aa19.43■□□□□ 0.7
CCDC47-202ENST00000403162 PTGER3P43115 390 aa19.43■□□□□ 0.7
CCDC47-202ENST00000403162 CLCN7P51798 805 aa19.43■□□□□ 0.7
CCDC47-202ENST00000403162 ISL1P61371 349 aa19.43■□□□□ 0.7
CCDC47-202ENST00000403162 ZNF691Q5VV52 312 aa19.43■□□□□ 0.7
CCDC47-202ENST00000403162 ADAMTSL2Q86TH1 951 aa19.43■□□□□ 0.7
CCDC47-202ENST00000403162 LGI2Q8N0V4 545 aa19.43■□□□□ 0.7
CCDC47-202ENST00000403162 OR5K1Q8NHB7 308 aa19.43■□□□□ 0.7
CCDC47-202ENST00000403162 GPR152Q8TDT2 470 aa19.43■□□□□ 0.7
CCDC47-202ENST00000403162 SH3GL1Q99961 368 aa19.43■□□□□ 0.7
CCDC47-202ENST00000403162 VN1R3Q9BXE9 311 aa19.43■□□□□ 0.7
CCDC47-202ENST00000403162 VWA8A3KMH1 1905 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 LOC100130705A0A1B0GUX0 176 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 GNGT2O14610 69 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 UGT2B11O75310 529 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 UGT2B4P06133 528 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 CNPP09543 421 aaKnown RBP19.42■□□□□ 0.7
CCDC47-202ENST00000403162 RYKP34925 604 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 IDUAP35475 653 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 TRAF3Q13114 568 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 IL18R1Q13478 541 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 MRPL58Q14197 206 aaKnown RBP19.42■□□□□ 0.7
CCDC47-202ENST00000403162 CTF1Q16619 201 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 ZRANB3Q5FWF4 1079 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 SPESP1Q6UW49 350 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 FRA10AC1Q70Z53 315 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 ADHFE1Q8IWW8 467 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 HS3ST5Q8IZT8 346 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 CFAP52Q8N1V2 620 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 CARNMT1Q8N4J0 409 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 TTC9BQ8N6N2 239 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 ZNF566Q969W8 418 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 NODALQ96S42 347 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 THUMPD3Q9BV44 507 aaKnown RBP19.42■□□□□ 0.7
CCDC47-202ENST00000403162 DGCR6LQ9BY27 220 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 RETREG1Q9H6L5 497 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 MAGIXQ9H6Y5 334 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 SCUBE2Q9NQ36 999 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 INIPQ9NRY2 104 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 CARNS1A5YM72 827 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 H7C0S8 307 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 CXCR6O00574 342 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 RETP07949 1114 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 CCDC159P0C7I6 412 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 HOXB6P17509 224 aaKnown RBP19.42■□□□□ 0.7
CCDC47-202ENST00000403162 AGXTP21549 392 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 NRIP1P48552 1158 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 GP2P55259 537 aaKnown RBP19.42■□□□□ 0.7
CCDC47-202ENST00000403162 PLIN5Q00G26 463 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 OCA2Q04671 838 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 TAF10Q12962 218 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 MAD2L1Q13257 205 aaPredicted RBP19.42■□□□□ 0.7
CCDC47-202ENST00000403162 KIAA1841Q6NSI8 718 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 RNF165Q6ZSG1 346 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 EID3Q8N140 333 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 TMCO5AQ8N6Q1 288 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 GLB1L3Q8NCI6 653 aaPredicted RBP19.42■□□□□ 0.7
CCDC47-202ENST00000403162 LPCAT1Q8NF37 534 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 FBLIM1Q8WUP2 373 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 RHBDF1Q96CC6 855 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 SMIM14Q96QK8 99 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 HMG20AQ9NP66 347 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 TRNAU1APQ9NX07 287 aaKnown RBP19.42■□□□□ 0.7
CCDC47-202ENST00000403162 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.42■□□□□ 0.7
CCDC47-202ENST00000403162 EVLQ9UI08 416 aaPredicted RBP19.42■□□□□ 0.7
CCDC47-202ENST00000403162 UTS2RQ9UKP6 389 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 EIF3LQ9Y262 564 aaKnown RBP19.42■□□□□ 0.7
CCDC47-202ENST00000403162 DHRS7Q9Y394 339 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 PCDHGB1Q9Y5G3 927 aa19.42■□□□□ 0.7
CCDC47-202ENST00000403162 H7C4K7 107 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 SLC16A6O15403 523 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 KDELR3O43731 214 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 EFEMP2O95967 443 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 KPNA1P52294 538 aaPredicted RBP19.41■□□□□ 0.7
CCDC47-202ENST00000403162 LAPTM5Q13571 262 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 OXA1LQ15070 435 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 SHHQ15465 462 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 MAPKAPK3Q16644 382 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 C18orf21Q32NC0 220 aaPredicted RBP19.41■□□□□ 0.7
CCDC47-202ENST00000403162 RFX4Q33E94 735 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 ZC3H12BQ5HYM0 836 aaKnown RBP19.41■□□□□ 0.7
CCDC47-202ENST00000403162 PRSS55Q6UWB4 352 aaPredicted RBP19.41■□□□□ 0.7
CCDC47-202ENST00000403162 SBSNQ6UWP8 590 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 ANKS3Q6ZW76 656 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 GPR149Q86SP6 731 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 MSRB3Q8IXL7 192 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 ZCCHC7Q8N3Z6 543 aaKnown RBP19.41■□□□□ 0.7
CCDC47-202ENST00000403162 PIK3C3Q8NEB9 887 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 POP5Q969H6 163 aaKnown RBP19.41■□□□□ 0.7
CCDC47-202ENST00000403162 FAM162AQ96A26 154 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 VMP1Q96GC9 406 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 MROQ9BYG7 248 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 WDR12Q9GZL7 423 aaKnown RBP19.41■□□□□ 0.7
CCDC47-202ENST00000403162 P2RY12Q9H244 342 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 IKZF5Q9H5V7 419 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 ARMC7Q9H6L4 198 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 SARS2Q9NP81 518 aaKnown RBP19.41■□□□□ 0.7
CCDC47-202ENST00000403162 DCAF13Q9NV06 445 aaKnown RBP19.41■□□□□ 0.7
CCDC47-202ENST00000403162 PAK1IP1Q9NWT1 392 aaPredicted RBP19.41■□□□□ 0.7
CCDC47-202ENST00000403162 SLC25A37Q9NYZ2 338 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms