RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 TAPBPO15533 448 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 SEC22BO75396 215 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 UGT2B4P06133 528 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 PGRP06401 933 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 OGNP20774 298 aaKnown RBP20.55■□□□□ 0.88
CTCF-202ENST00000401394 TRAF3Q13114 568 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 CLIP4Q8N3C7 705 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 RORBQ92753 470 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 TSSK3Q96PN8 268 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 OR52E6Q96RD3 313 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 DLGAP4Q9Y2H0 992 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 C16orf96A6NNT2 1141 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 M0QZ92 97 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 SH3BGRLO75368 114 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 GTF2E2P29084 291 aaKnown RBP20.55■□□□□ 0.88
CTCF-202ENST00000401394 DAPP51397 102 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 CASP9P55211 416 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 GNASQ5JWF2 1037 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 CCDC71Q8IV32 467 aaPredicted RBP20.55■□□□□ 0.88
CTCF-202ENST00000401394 LEMD2Q8NC56 503 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 FAM83FQ8NEG4 500 aaPredicted RBP20.55■□□□□ 0.88
CTCF-202ENST00000401394 TSPEARQ8WU66 669 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 FBXO32Q969P5 355 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 CNDP2Q96KP4 475 aaKnown RBP20.55■□□□□ 0.88
CTCF-202ENST00000401394 PPP1R2P1Q96PQ5 205 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 DPH2Q9BQC3 489 aaPredicted RBP20.55■□□□□ 0.88
CTCF-202ENST00000401394 NUSAP1Q9BXS6 441 aaKnown RBP20.55■□□□□ 0.88
CTCF-202ENST00000401394 HMG20AQ9NP66 347 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 HEBP1Q9NRV9 189 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 CCL27Q9Y4X3 112 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 PRSS21Q9Y6M0 314 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 STX16O14662 325 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 KLK8O60259 260 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 RPL9P32969 192 aaKnown RBP20.55■□□□□ 0.88
CTCF-202ENST00000401394 CPSF6Q16630 551 aaKnown RBP eCLIP20.55■□□□□ 0.88
CTCF-202ENST00000401394 COLEC12Q5KU26 742 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 SBSNQ6UWP8 590 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 RNF19BQ6ZMZ0 732 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 RASAL3Q86YV0 1011 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 ZNF382Q96SR6 550 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 RBM4BQ9BQ04 359 aaKnown RBP20.55■□□□□ 0.88
CTCF-202ENST00000401394 RBM4Q9BWF3 364 aaKnown RBP20.55■□□□□ 0.88
CTCF-202ENST00000401394 UGT2B28Q9BY64 529 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 ATAD3AQ9NVI7 634 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 SEPT3Q9UH03 358 aa20.55■□□□□ 0.88
CTCF-202ENST00000401394 ZFP37Q9Y6Q3 630 aaPredicted RBP20.55■□□□□ 0.88
CTCF-202ENST00000401394 H0Y626 953 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 M0QZQ0 153 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 M0R129 80 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 PER2O15055 1255 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 TRIM16O95361 564 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 PABPC1P11940 636 aaKnown RBP20.54■□□□□ 0.88
CTCF-202ENST00000401394 RGMBQ6NW40 437 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 AHSA2Q719I0 299 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 PJA1Q8NG27 643 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 SEPT5Q99719 369 aaPredicted RBP20.54■□□□□ 0.88
CTCF-202ENST00000401394 EGFL8Q99944 293 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 PDFQ9HBH1 243 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 GPRC5BQ9NZH0 403 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 GPC6Q9Y625 555 aaPredicted RBP20.54■□□□□ 0.88
CTCF-202ENST00000401394 TBX1O43435 398 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 DNTTP04053 509 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 GKP32189 559 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 SPATC1Q76KD6 591 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 RGL4Q8IZJ4 473 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 ZNF540Q8NDQ6 660 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 DPY30Q9C005 99 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 SIRT5Q9NXA8 310 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 TRPV2Q9Y5S1 764 aa20.54■□□□□ 0.88
CTCF-202ENST00000401394 A0A096LPI6 279 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 TYW5A2RUC4 315 aaKnown RBP20.53■□□□□ 0.88
CTCF-202ENST00000401394 CYP11A1P05108 521 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 C21orf33P30042 268 aaPredicted RBP20.53■□□□□ 0.88
CTCF-202ENST00000401394 CLCA4Q14CN2 919 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 FAM151BQ6UXP7 276 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 LRRC49Q8IUZ0 686 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 BTN2A3PQ96KV6 586 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 CIPCQ9C0C6 399 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 AP5M1Q9H0R1 490 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 GREB1Q4ZG55 1949 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 MYO16Q9Y6X6 1858 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 SSX4O60224 188 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 GLUD1P00367 558 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 IGFBP5P24593 272 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 OR1G1P47890 313 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 CLCN7P51798 805 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 CRISP3P54108 245 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 AFTPHQ6ULP2 937 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 EID3Q8N140 333 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 NKAPQ8N5F7 415 aaKnown RBP20.53■□□□□ 0.88
CTCF-202ENST00000401394 PALMDQ9NP74 551 aa20.53■□□□□ 0.88
CTCF-202ENST00000401394 AFF4Q9UHB7 1163 aaKnown RBP20.53■□□□□ 0.88
CTCF-202ENST00000401394 IGLV3-10A0A075B6K4 115 aa20.52■□□□□ 0.88
CTCF-202ENST00000401394 LOC730098B7Z3J9 87 aa20.52■□□□□ 0.88
CTCF-202ENST00000401394 FFAR2O15552 330 aa20.52■□□□□ 0.88
CTCF-202ENST00000401394 ITIH1P19827 911 aa20.52■□□□□ 0.88
CTCF-202ENST00000401394 P2RY8Q86VZ1 359 aa20.52■□□□□ 0.88
CTCF-202ENST00000401394 CINPQ9BW66 212 aaPredicted RBP20.52■□□□□ 0.88
CTCF-202ENST00000401394 GORASP2Q9H8Y8 452 aa20.52■□□□□ 0.88
CTCF-202ENST00000401394 SPC25Q9HBM1 224 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms