RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 C12orf66Q96MD2 445 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 PWWP2AQ96N64 755 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 PAFAH2Q99487 392 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 GPR21Q99679 349 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 C1QTNF3Q9BXJ4 246 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 STRADBQ9C0K7 418 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 PARVBQ9HBI1 364 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 C1GALT1Q9NS00 363 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 INTS7Q9NVH2 962 aaKnown RBP7.32□□□□□ -1.24
USP16-204ENST00000399976 KCNK4Q9NYG8 393 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 MSRB2Q9Y3D2 182 aa7.32□□□□□ -1.24
USP16-204ENST00000399976 PDZK1P1A8MUH7 402 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 C2orf74A8MZ97 194 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 B4GAT1O43505 415 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 EML2O95834 649 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 ONECUT2O95948 504 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 PROS1P07225 676 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 INHBAP08476 426 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 ARFIP1P53367 373 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 CDKN2DP55273 166 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 RAB15P59190 212 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 NFKB2Q00653 900 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 PDAP1Q13442 181 aaKnown RBP7.31□□□□□ -1.24
USP16-204ENST00000399976 ACAP2Q15057 778 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 ZNF789Q5FWF6 425 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 TNFAIP8L3Q5GJ75 292 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 PERM1Q5SV97 790 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 GUSBP11Q6P575 273 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 RD3Q7Z3Z2 195 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 LRRC56Q8IYG6 542 aaPredicted RBP7.31□□□□□ -1.24
USP16-204ENST00000399976 LRRN4CLQ8ND94 238 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 OR9A1PQ8NGU1 263 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 FLVCR1-AS1Q8TAF5 88 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 GFM1Q96RP9 751 aaKnown RBP7.31□□□□□ -1.24
USP16-204ENST00000399976 TRIM54Q9BYV2 358 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 EHD1Q9H4M9 534 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 NT5DC2Q9H857 520 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 VIPAS39Q9H9C1 493 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 FBXO8Q9NRD0 319 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 MOSPD1Q9UJG1 213 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 STK38LQ9Y2H1 464 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 PLEKHM1Q9Y4G2 1056 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 BPTFQ12830 3046 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 CCDC187A0A096LP49 1063 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 CXorf49A8MYA2 514 aaPredicted RBP7.31□□□□□ -1.24
USP16-204ENST00000399976 ZBTB14O43829 449 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 SDC3O75056 442 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 CHRM3P20309 590 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 GCAP28676 217 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 MSH2P43246 934 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 SLC18A1P54219 525 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 IL9RQ01113 521 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 C1orf61Q13536 156 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 GPR18Q14330 331 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 TAF1BQ53T94 588 aaPredicted RBP7.31□□□□□ -1.24
USP16-204ENST00000399976 ZNF542PQ5EBM4 170 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 FAM182AQ5T1J6 154 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 KDM7AQ6ZMT4 941 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 LMNTD1Q8N9Z9 388 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 OR2I1PQ8NGU4 316 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 RDH11Q8TC12 318 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 DENND1AQ8TEH3 1009 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 ZUFSPQ96AP4 578 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 ALKBH8Q96BT7 664 aaKnown RBP7.31□□□□□ -1.24
USP16-204ENST00000399976 WDR34Q96EX3 536 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 CCDC97Q96F63 343 aaPredicted RBP7.31□□□□□ -1.24
USP16-204ENST00000399976 ZNF285Q96NJ3 590 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 SLC38A3Q99624 504 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 SGPP1Q9BX95 441 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 PARD6BQ9BYG5 372 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 NUDT4Q9NZJ9 180 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 ICKQ9UPZ9 632 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 PSAT1Q9Y617 370 aa7.31□□□□□ -1.24
USP16-204ENST00000399976 EXOC1LA0A1B0GW35 172 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 SYCE1LA8MT33 242 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 FFAR2O15552 330 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 KERAO60938 352 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 SNUPNO95149 360 aaKnown RBP7.3□□□□□ -1.24
USP16-204ENST00000399976 KLHL2O95198 593 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 MT-CO3P00414 261 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 CYC1P08574 325 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 SLC35E2BP0CK96 405 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 MYBL2P10244 700 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 SLC12A2P55011 1212 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 INHBCP55103 352 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 SPIDRQ14159 915 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 UAP1Q16222 522 aaPredicted RBP7.3□□□□□ -1.24
USP16-204ENST00000399976 ISXQ2M1V0 245 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 ACSBG2Q5FVE4 666 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 PPM1JQ5JR12 505 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 RBM20Q5T481 1227 aaKnown RBP7.3□□□□□ -1.24
USP16-204ENST00000399976 LCTLQ6UWM7 567 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 SBSNQ6UWP8 590 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 DET1Q7L5Y6 550 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 SLCO6A1Q86UG4 719 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 AMIGO1Q86WK6 493 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 CCDC25Q86WR0 208 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 ADGRF3Q8IZF5 1079 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 UNC5BQ8IZJ1 945 aa7.3□□□□□ -1.24
USP16-204ENST00000399976 OR52E1Q8NGJ3 308 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms