RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 PCBD2Q9H0N5 130 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 AGO3Q9H9G7 860 aaKnown RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 TCF7L2Q9NQB0 619 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 SAMD4AQ9UPU9 718 aaKnown RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 POLR3HQ9Y535 204 aaPredicted RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 MST1RQ04912 1400 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 A6NLC8 198 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 YDJCA8MPS7 323 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 NPIPA5E9PKD4 350 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 STMND1H3BQB6 276 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 TNFAIP8O95379 198 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 ADH1BP00325 375 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 TSHRP16473 764 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 CLCN5P51795 746 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 MAPKAPK3Q16644 382 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 USP53Q70EK8 1073 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 ZNF554Q86TJ5 538 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 DHFR2Q86XF0 187 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 UBQLNLQ8IYU4 475 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 SPATA6LQ8N4H0 392 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 TMEM121BQ9BXQ6 578 aaPredicted RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 PTGES2Q9H7Z7 377 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 IL21RQ9HBE5 538 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 IL23AQ9NPF7 189 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 NPIPA1Q9UND3 350 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 ASB3Q9Y575 518 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 BACE2Q9Y5Z0 518 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 ABCC6O95255 1503 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 A0A0G2JN53 185 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 MPPED1O15442 326 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 RAB15P59190 212 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 CLIP4Q8N3C7 705 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 OR6N1Q8NGY5 312 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 KLHL15Q96M94 604 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 TSPAN18Q96SJ8 248 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 SSX3Q99909 188 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 GORASP1Q9BQQ3 440 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 GDAP2Q9NXN4 497 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 ZNF490Q9ULM2 529 aaPredicted RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 SPIN1Q9Y657 262 aaPredicted RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 EIF1AYO14602 144 aaKnown RBP10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 OAZ2O95190 189 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 PRKCGP05129 697 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 LINC00032P0C843 101 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 STOMP27105 288 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 IL18Q14116 193 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 PKDCCQ504Y2 493 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 TPGS2Q68CL5 300 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 C12orf40Q86WS4 652 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 BPIFB6Q8NFQ5 453 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 NINJ1Q92982 152 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 NECTIN4Q96NY8 510 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 ZNF649Q9BS31 505 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 IKZF3Q9UKT9 509 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 ACAD8Q9UKU7 415 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 ING4Q9UNL4 249 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 KPNA4O00629 521 aaPredicted RBP10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 PRKAR1AP10644 381 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 TFEBP19484 476 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 GADD45AP24522 165 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 OXTRP30559 389 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 PRR5P85299 388 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 CD47Q08722 323 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 KHDC1LQ5JSQ8 128 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 OR7D4Q8NG98 312 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 GTPBP3Q969Y2 492 aaKnown RBP10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 Q96MT0 163 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 ETNK2Q9NVF9 386 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 RUVBL1Q9Y265 456 aaKnown RBP10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 C2CD2Q9Y426 696 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 PCDHA2Q9Y5H9 948 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 C6orf89Q6UWU4 347 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 ADGRA1Q86SQ6 560 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 CEP97Q8IW35 865 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 OR8H3Q8N146 312 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 FAM110BQ8TC76 370 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 C2orf15Q8WU43 125 aaKnown RBP10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 C1orf50Q9BV19 199 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 KCNK13Q9HB14 408 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 ENAMQ9NRM1 1142 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 CENPMQ9NSP4 180 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 A0A1B0GVM2 712 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 TCAF2A6NFQ2 919 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 TVP23AA6NH52 213 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 TPP1O14773 563 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 ALADP13716 330 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 PRKAA2P54646 552 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 MLLT6P55198 1093 aaPredicted RBP10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 SH3PXD2AQ5TCZ1 1133 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 SYVN1Q86TM6 617 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 RANBP3LQ86VV4 465 aaPredicted RBP10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 GALNT15Q8N3T1 639 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 POC5Q8NA72 575 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 SETD9Q8NE22 299 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 OR4K2Q8NGD2 314 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 GDPD5Q8WTR4 605 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 NUAK2Q9H093 628 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 ATXN10Q9UBB4 475 aa10.78□□□□□ -0.68
CACNA1C-216ENST00000399638 CASZ1Q86V15 1759 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms