RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 RGPD2P0DJD1 1756 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 A0A096LPI6 279 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 ZCWPW2A0A1B0GU75 182 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 HMX3A6NHT5 357 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 ISM1B1AKI9 464 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 INMT-MINDY4F8WBC2 141 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 PPP6CO00743 305 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 ENDOD1O94919 500 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 GABARAPO95166 117 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 CPNE6O95741 557 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 HPRP00739 348 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 HOXC6P09630 235 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 NR2F6P10588 404 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 ITGA2P17301 1181 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 C21orf33P30042 268 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 CHI3L1P36222 383 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 SLC26A2P50443 739 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 ZNF135P52742 658 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 CDH12P55289 794 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 DNAJB13P59910 316 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 CSNK2BP67870 215 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 CRTC2Q53ET0 693 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 ARSKQ6UWY0 536 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 USP30Q70CQ3 517 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 COMMD7Q86VX2 200 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 SYT12Q8IV01 421 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 RTP4Q96DX8 246 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 LINGO1Q96FE5 620 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 RPRD1AQ96P16 312 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 C1QTNF1Q9BXJ1 281 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 BEX1Q9HBH7 125 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 GPBP1L1Q9HC44 474 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 SMURF1Q9HCE7 757 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 MAP3K20Q9NYL2 800 aaKnown RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 RCOR3Q9P2K3 495 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 NFKBIL1Q9UBC1 381 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 CD300AQ9UGN4 299 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 FZD10Q9ULW2 581 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 VPS9D1Q9Y2B5 631 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 ZNF451Q9Y4E5 1061 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 TRAV6A0A075B6T7 132 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 TRAV19A0A0A6YYK7 116 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 A0A0G2JPF8 293 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 MGAT4DA6NG13 374 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 HNRNPCL3B7ZW38 293 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 H3BUI4 141 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 HNRNPCL4P0DMR1 293 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 SPNP16150 400 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 CYP2A7P20853 494 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 SSTR4P31391 388 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 DNAJA1P31689 397 aaKnown RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 PIGAP37287 484 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 NDUFV1P49821 464 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 RABGGTBP53611 331 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 RPS7P62081 194 aaKnown RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 DBPQ10586 325 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 LRRC26Q2I0M4 334 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 SPDYE7PQ495Y7 208 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 SV2CQ496J9 727 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 GNASQ5JWF2 1037 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 XKRXQ6PP77 449 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 FAM92BQ6ZTR7 304 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 BEND5Q7L4P6 421 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 MIB1Q86YT6 1006 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 STK40Q8N2I9 435 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 TMEM130Q8N3G9 435 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 PTERQ96BW5 349 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 COL21A1Q96P44 957 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 CSF3RQ99062 836 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 SPATA9Q9BWV2 254 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 DPEP3Q9H4B8 488 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 UXTQ9UBK9 157 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 UBQLN1Q9UMX0 589 aaKnown RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 PPIEQ9UNP9 301 aaKnown RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 C5P01031 1676 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 M0QZ92 97 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 GPR25O00155 361 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 HBP1O60381 514 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 JUNBP17275 347 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 CYP2B6P20813 491 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 GPX3P22352 226 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 IL4RP24394 825 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 CCNCP24863 283 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 MAPK1P28482 360 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 DCTP40126 519 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 HMGCS1Q01581 520 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 TAGLNQ01995 201 aaKnown RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 GALEQ14376 348 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 FBXO43Q4G163 708 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 TECRLQ5HYJ1 363 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 GHDCQ8N2G8 530 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 NKAPQ8N5F7 415 aaKnown RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 ASIC4Q96FT7 647 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 BRD7Q9NPI1 651 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 C1orf109Q9NX04 203 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 CPA4Q9UI42 421 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 A0A1W2PQ09 198 aa9.13□□□□□ -0.95
COL28A1-201ENST00000399429 PDGFAP04085 211 aa9.13□□□□□ -0.95
COL28A1-201ENST00000399429 ALDH2P05091 517 aa9.13□□□□□ -0.95
COL28A1-201ENST00000399429 GNPDA1P46926 289 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms