RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 NXPE1Q8N323 547 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 SVOPLQ8N434 492 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 WFDC5Q8TCV5 224 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 AURKBQ96GD4 344 aaPredicted RBP11.14□□□□□ -0.63
C4orf3-201ENST00000399075 OSBPL6Q9BZF3 934 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 TM6SF2Q9BZW4 377 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 LIN28AQ9H9Z2 209 aaKnown RBP11.14□□□□□ -0.63
C4orf3-201ENST00000399075 USE1Q9NZ43 259 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 ZNHIT2Q9UHR6 403 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 CRLS1Q9UJA2 301 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 V9GYQ6 96 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 K7ERQ8 282 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 GSTA4O15217 222 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 TRIM16O95361 564 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 SOD2P04179 222 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 PGRP06401 933 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 IL1RNP18510 177 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 ITGB6P18564 788 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 PMS2P3Q13401 168 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 RAB39AQ14964 217 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 RUNDC3AQ59EK9 446 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 ATG9BQ674R7 924 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 TPGS1Q6ZTW0 290 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 MSRB3Q8IXL7 192 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 FAM9CQ8IZT9 166 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 CLDN19Q8N6F1 224 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 PJA1Q8NG27 643 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 RAET1EQ8TD07 263 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 APOL5Q9BWW9 433 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 MAGIXQ9H6Y5 334 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 ATP13A3Q9H7F0 1226 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 POLR1BQ9H9Y6 1135 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 C1orf109Q9NX04 203 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 KCTD5Q9NXV2 234 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 IFT80Q9P2H3 777 aaPredicted RBP11.14□□□□□ -0.63
C4orf3-201ENST00000399075 KLQ9UEF7 1012 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 EVLQ9UI08 416 aaPredicted RBP11.14□□□□□ -0.63
C4orf3-201ENST00000399075 TSR3Q9UJK0 312 aaKnown RBP11.14□□□□□ -0.63
C4orf3-201ENST00000399075 ZNF490Q9ULM2 529 aaPredicted RBP11.14□□□□□ -0.63
C4orf3-201ENST00000399075 SH3GLB1Q9Y371 365 aa11.14□□□□□ -0.63
C4orf3-201ENST00000399075 CLDN7O95471 211 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 CXCL10P02778 98 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 RETP07949 1114 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 MTHFRP42898 656 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 HNRNPFP52597 415 aaKnown RBP11.13□□□□□ -0.63
C4orf3-201ENST00000399075 CHRNA6Q15825 494 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 RBM48Q5RL73 367 aaKnown RBP11.13□□□□□ -0.63
C4orf3-201ENST00000399075 TTC23Q5W5X9 447 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 KCTD8Q6ZWB6 473 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 DNAJB7Q7Z6W7 309 aaPredicted RBP11.13□□□□□ -0.63
C4orf3-201ENST00000399075 ZDHHC13Q8IUH4 622 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 PLPP6Q8IY26 295 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 LIX1Q8N485 282 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 SLC22A17Q8WUG5 538 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 SDCCAG3Q96C92 435 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 HMX1Q9NP08 348 aaPredicted RBP11.13□□□□□ -0.63
C4orf3-201ENST00000399075 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.13□□□□□ -0.63
C4orf3-201ENST00000399075 CDC14AQ9UNH5 594 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 MAN2B2Q9Y2E5 1009 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 GMEB1Q9Y692 573 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 OBSL1O75147 1896 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 ELOVL7A1L3X0 281 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 FAM220BPB1ANY3 271 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 SMAD6O43541 496 aaKnown RBP11.13□□□□□ -0.63
C4orf3-201ENST00000399075 ERN1O75460 977 aaKnown RBP11.13□□□□□ -0.63
C4orf3-201ENST00000399075 STK16O75716 305 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 IGSF6O95976 241 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 KRT6AP02538 564 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 KRT6BP04259 564 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 INHAP05111 366 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 GGT5P36269 586 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 NSG1P42857 185 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 KRT6CP48668 564 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 IMPG1Q17R60 797 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 GGTA1PQ4G0N0 100 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 USP39Q53GS9 565 aaKnown RBP11.13□□□□□ -0.63
C4orf3-201ENST00000399075 OTUD3Q5T2D3 398 aaPredicted RBP11.13□□□□□ -0.63
C4orf3-201ENST00000399075 MPP7Q5T2T1 576 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 LRIF1Q5T3J3 769 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 RGL4Q8IZJ4 473 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 ULK4Q96C45 1275 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 MUS81Q96NY9 551 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 THUMPD3Q9BV44 507 aaKnown RBP11.13□□□□□ -0.63
C4orf3-201ENST00000399075 SLC25A37Q9NYZ2 338 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 TDRKHQ9Y2W6 561 aaKnown RBP11.13□□□□□ -0.63
C4orf3-201ENST00000399075 HTR3EA5X5Y0 456 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 NPIPB8E9PQR5 432 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 H3BMQ9 156 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 FFAR3O14843 346 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 GPR42O15529 346 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 PRPH2P23942 346 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 TUBA3CQ13748 450 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 RAB33AQ14088 237 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 AAK1Q2M2I8 961 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 SPANXN4Q5MJ08 99 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 GPR149Q86SP6 731 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 STK32CQ86UX6 486 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 CALHM3Q86XJ0 350 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 MICU2Q8IYU8 434 aa11.13□□□□□ -0.63
C4orf3-201ENST00000399075 APCDD1Q8J025 514 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms