RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 YBX1P67809 324 aaKnown RBP4.84□□□□□ -1.64
SMAD4-202ENST00000398417 PMS2P3Q13401 168 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 BLOC1S3Q6QNY0 202 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.84□□□□□ -1.645e-7■■□□□ 13.4
SMAD4-202ENST00000398417 PIWIL3Q7Z3Z3 882 aaKnown RBP4.84□□□□□ -1.64
SMAD4-202ENST00000398417 SPRED1Q7Z699 444 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 NPAS4Q8IUM7 802 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 ZC3H7AQ8IWR0 971 aaKnown RBP4.84□□□□□ -1.64
SMAD4-202ENST00000398417 MINDY1Q8N5J2 469 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 REXO5Q96IC2 774 aaKnown RBP4.84□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF597Q96LX8 424 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 TMEM165Q9HC07 324 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 GPRC5BQ9NZH0 403 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 ACTR3BQ9P1U1 418 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 SH3D21A4FU49 640 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 AP1G1O43747 822 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 OAZ2O95190 189 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 EOMESO95936 686 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 IGLV3-25P01717 112 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 CYP2A7P20853 494 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 AGXTP21549 392 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SLC6A2P23975 617 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SPAM1P38567 509 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 FOXM1Q08050 763 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 STARD3Q14849 445 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 PAGE2BQ5JRK9 111 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 STK40Q8N2I9 435 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 TMEM132CQ8N3T6 1108 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF540Q8NDQ6 660 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ARAP2Q8WZ64 1704 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SH3KBP1Q96B97 665 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 AURKBQ96GD4 344 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 PKMYT1Q99640 499 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 C1orf109Q9NX04 203 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF229Q9UJW7 825 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 TMCO1Q9UM00 188 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 PADI4Q9UM07 663 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 BCORQ6W2J9 1755 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 LINC00854A0A1B0GVQ3 168 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 STX16O14662 325 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 PRLP01236 227 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 DBTP11182 482 aaKnown RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ATF6P18850 670 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 MAGP20916 626 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 HOXD9P28356 352 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 HTR1EP28566 365 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 AQP1P29972 269 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 DGKEP52429 567 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ACSM2AQ08AH3 577 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 APOFQ13790 326 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 TIGD6Q17RP2 521 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 TRIM16LQ309B1 348 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 RFTN2Q52LD8 501 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ACSM2BQ68CK6 577 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 RFLNAQ6ZTI6 216 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ADAMTSL2Q86TH1 951 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 RGL4Q8IZJ4 473 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ELMOD1Q8N336 334 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 DRAXINQ8NBI3 349 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 LINC01599Q8WXQ3 324 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 NELL1Q92832 810 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 COPS8Q99627 209 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 MRPL9Q9BYD2 267 aaKnown RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 TOR3AQ9H497 397 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ARNT2Q9HBZ2 717 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 DUSP12Q9UNI6 340 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 A0A1B0GVM2 712 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ANKRD33BA6NCL7 494 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 A8MV72 311 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SEC24AO95486 1093 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 NADKO95544 446 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 OPN1SWP03999 348 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 BMP2P12643 396 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 HSD17B1P14061 328 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF140P52738 457 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 NAA20P61599 178 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SP3Q02447 781 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 LRRC74AQ0VAA2 488 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 CCDC85BQ15834 202 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 OGFOD2Q6N063 350 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 DOK6Q6PKX4 331 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SLC22A25Q6T423 547 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 TSPAN33Q86UF1 283 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 TMEM126BQ8IUX1 230 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 CNIH3Q8TBE1 160 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 TEX37Q96LM6 180 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 NSMCE3Q96MG7 304 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 FEM1AQ9BSK4 669 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 YIPF2Q9BWQ6 316 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 RPF2Q9H7B2 306 aaKnown RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 RAD18Q9NS91 495 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 DNAJC11Q9NVH1 559 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 KCTD5Q9NXV2 234 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SLC25A13Q9UJS0 675 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 A0A1W2PP18 115 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ILVBLA1L0T0 632 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 TMX2-CTNND1H3BSU7 103 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 UGT2B4P06133 528 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 UMPSP11172 480 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 GGT1P19440 569 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms