RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ZSCAN1Q8NBB4 408 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 HIST1H2AAQ96QV6 131 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 ABCB10Q9NRK6 738 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 PCDHB3Q9Y5E6 796 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 BRAT1Q6PJG6 821 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 SLC22A18Q96BI1 424 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 COQ8BQ96D53 544 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 C1GALT1C1Q96EU7 318 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 ELOVL7A1L3X0 281 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 CDH12P55289 794 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 ENPEPQ07075 957 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 OR6K6Q8NGW6 343 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 TRMOQ9BU70 441 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 TNFRSF21O75509 655 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 NR2F6P10588 404 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 SCNN1AP37088 669 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 ZNF846Q147U1 533 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 ZNF792Q3KQV3 632 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 GPR107Q5VW38 600 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 PIGXQ8TBF5 258 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 PRICKLE1Q96MT3 831 aaPredicted RBP11.15□□□□□ -0.63
TTC28-201ENST00000397906 BRD7Q9NPI1 651 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 PPM1HQ9ULR3 514 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 HYKKA2RU49 373 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 LAMTOR5O43504 91 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 REM1O75628 298 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 C8orf89P0DMQ9 161 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 PDHA2P29803 388 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 PUM1Q14671 1186 aaKnown RBP eCLIP11.15□□□□□ -0.63
TTC28-201ENST00000397906 FAM174BQ3ZCQ3 159 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 LY6G5CQ5SRR4 150 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 CLPTM1LQ96KA5 538 aa11.15□□□□□ -0.63
TTC28-201ENST00000397906 PGRMC2O15173 223 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 RLN1P04808 185 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 CCNOP22674 350 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 RFTN1Q14699 578 aaPredicted RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 RNF43Q68DV7 783 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 OR51V1Q9H2C8 321 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 ZNF142P52746 1687 aaPredicted RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 SNAI1O95863 264 aaPredicted RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 RHOP08100 348 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 EIF2B2P49770 351 aaKnown RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 AMIGO3Q86WK7 504 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 OR10A6Q8NH74 314 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 PIWIL1Q96J94 861 aaKnown RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 RTKNQ9BST9 563 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 METTL7AQ9H8H3 244 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 IGKV6D-41A0A0C4DH26 115 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 GBAP04062 536 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 ALPPP05187 535 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 TMPRSS11AQ6ZMR5 421 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 CLNKQ7Z7G1 428 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 TRIB2Q92519 343 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 SLC38A4Q969I6 547 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 CIB1Q99828 191 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 DNAAF2Q9NVR5 837 aaKnown RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.14□□□□□ -0.63
TTC28-201ENST00000397906 SHOX2O60902 331 aaPredicted RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 FOSL2P15408 326 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 KCNJ2P63252 427 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 MYLK3Q32MK0 819 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 TRIM74Q86UV6 250 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 RASGEF1AQ8N9B8 481 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 ABCB9Q9NP78 766 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 FADS2P1A8MWK0 482 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 NOS1APO75052 506 aaPredicted RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 PFKMP08237 780 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 ATP1B2P14415 290 aaPredicted RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 CHRNB2P17787 502 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 CXCR1P25024 350 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 CBX5P45973 191 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 ELF3P78545 371 aaPredicted RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 PRAMEF14Q5SWL7 426 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 PRAMEF13Q5VWM6 474 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 OR2AP1Q8NGE2 309 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 ZNF570Q96NI8 536 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 MIPEPQ99797 713 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 CCM2Q9BSQ5 444 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 PCDHGA11Q9Y5H2 935 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 IGFBP5P24593 272 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 CCNHP51946 323 aaPredicted RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 PPP3R1P63098 170 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 IKBIPQ70UQ0 350 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 P2RY13Q9BPV8 354 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 DHRS7Q9Y394 339 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 XRN1Q8IZH2 1706 aaKnown RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 BBIP1A8MTZ0 92 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 ADAMTS3O15072 1205 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 CYB5AP00167 134 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 IFNA6P05013 189 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 TBX5Q99593 518 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 GORASP1Q9BQQ3 440 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 IRAK3Q9Y616 596 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 FAM149AA5PLN7 773 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 H3BSH0 61 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 NME6O75414 186 aaPredicted RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 PPIDQ08752 370 aaKnown RBP11.14□□□□□ -0.63
TTC28-201ENST00000397906 FBXO42Q6P3S6 717 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 SLC9B2Q86UD5 537 aa11.14□□□□□ -0.63
TTC28-201ENST00000397906 ZNF527Q8NB42 609 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms