RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 DYTNA2CJ06 578 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 RGS14O43566 566 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SEC22BO75396 215 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 BCL2A1Q16548 175 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 FXNQ16595 210 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ATP13A5Q4VNC0 1218 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 OTUD3Q5T2D3 398 aaPredicted RBP17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TMEM214Q6NUQ4 689 aaKnown RBP17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ITIH5Q86UX2 942 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 RGL4Q8IZJ4 473 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 LIX1Q8N485 282 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLC13A3Q8WWT9 602 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ULK4Q96C45 1275 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 HEPHQ9BQS7 1158 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 IKZF5Q9H5V7 419 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SNAP29O95721 258 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SRCP12931 536 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CPSF6Q16630 551 aaKnown RBP eCLIP17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 IMPG1Q17R60 797 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ANKDD1AQ495B1 522 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SPANXN4Q5MJ08 99 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 C6orf183Q5T699 404 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ZNF583Q96ND8 569 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TMEM45AQ9NWC5 275 aa17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 EIF3LQ9Y262 564 aaKnown RBP17.95■□□□□ 0.46
CHRFAM7A-202ENST00000397827 KRT87PA6NCN2 255 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CLOCKO15516 846 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 KCNH1O95259 989 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 EPB42P16452 691 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 LHCGRP22888 699 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MAPK8P45983 427 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 RPS9P46781 194 aaKnown RBP17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ALDH3B2P48448 385 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 B4GALNT1Q00973 533 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 GPR33Q49SQ1 333 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MPPE1Q53F39 396 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SUSD1Q6UWL2 747 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 HTR3DQ70Z44 454 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 DET1Q7L5Y6 550 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 FAM86B1Q8N7N1 296 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 OR10A6Q8NH74 314 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 FIBINQ8TAL6 211 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 FIG4Q92562 907 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 COX4I2Q96KJ9 171 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SMPD3Q9NY59 655 aaPredicted RBP17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SPG21Q9NZD8 308 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 THEGQ9P2T0 379 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MAGEL2Q9UJ55 1249 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 COQ6Q9Y2Z9 468 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MAGED1Q9Y5V3 778 aaPredicted RBP17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 FUOMA2VDF0 154 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CCR7P32248 378 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PTSQ03393 145 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SPIDRQ14159 915 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SMUG1Q53HV7 270 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CNKSR3Q6P9H4 555 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 BORAQ6PGQ7 559 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 HM13Q8TCT9 377 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SKA2Q8WVK7 121 aaPredicted RBP17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 GTF2H4Q92759 462 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ZNF689Q96CS4 500 aaPredicted RBP17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 THUMPD3Q9BV44 507 aaKnown RBP17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 DPY30Q9C005 99 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ARL15Q9NXU5 204 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CD84Q9UIB8 345 aa17.94■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TGM5O43548 720 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 FKTNO75072 461 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 STK16O75716 305 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MSH3P20585 1137 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 HLA-FP30511 346 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 NSG1P42857 185 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 GNPDA1P46926 289 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CSNK1DP48730 415 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 RPIAP49247 311 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 HSPA14Q0VDF9 509 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CRY1Q16526 586 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MAPKAPK3Q16644 382 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CYBRD1Q53TN4 286 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 LYPLAL1Q5VWZ2 237 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLC39A5Q6ZMH5 540 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ITFG1Q8TB96 612 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TBCDQ9BTW9 1192 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ARMC7Q9H6L4 198 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 GRXCR2A6NFK2 248 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MANBAO00462 879 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PLCL1Q15111 1095 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ZXDCQ2QGD7 858 aaPredicted RBP17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TTLL9Q3SXZ7 439 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 GTDC1Q4AE62 458 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TPRG1Q6ZUI0 275 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ANKRD33Q7Z3H0 272 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 DDX53Q86TM3 631 aaKnown RBP17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 RIMKLAQ8IXN7 391 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 REM2Q8IYK8 340 aaPredicted RBP17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 DHRSXQ8N5I4 330 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SCAIQ8N9R8 606 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 BPIFB1Q8TDL5 484 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SCRN2Q96FV2 425 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ZBTB18Q99592 522 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms