RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 PYCR2Q96C36 320 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 CENPNQ96H22 339 aaPredicted RBP23.25■■□□□ 1.31
PABPN1-202ENST00000397276 TOX2Q96NM4 488 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 COPS8Q99627 209 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 PIKFYVEQ9Y2I7 2098 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 ABHD14A-ACY1A0A1B0GW23 586 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 LILRB3O75022 631 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 CXCL14O95715 111 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 CSNK1DP48730 415 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 CCT8P50990 548 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 EEFSECP57772 596 aaKnown RBP23.25■■□□□ 1.31
PABPN1-202ENST00000397276 FAM174BQ3ZCQ3 159 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 ZBED5Q49AG3 693 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 C22orf39Q6P5X5 142 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 BEGAINQ9BUH8 593 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 CXorf21Q9HAI6 301 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 INIPQ9NRY2 104 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 RGS14O43566 566 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 DFNA5O60443 496 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 GPIP06744 558 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 YAP1P46937 504 aaKnown RBP23.24■■□□□ 1.31
PABPN1-202ENST00000397276 LYPLAL1Q5VWZ2 237 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 TMEM26Q6ZUK4 368 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 USP45Q70EL2 814 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 RGL4Q8IZJ4 473 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 LIX1Q8N485 282 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 TCEAL4Q96EI5 215 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 VPS50Q96JG6 964 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 CGREF1Q99674 301 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 VAPAQ9P0L0 249 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 EI24O14681 340 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 STK16O75716 305 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 ESRRGP62508 458 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 TTLL9Q3SXZ7 439 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 PYCR3Q53H96 274 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 MPP7Q5T2T1 576 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 CROCCP3Q8IVE0 287 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 CYGBQ8WWM9 190 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 PPP3R2Q96LZ3 170 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 NPLQ9BXD5 320 aaPredicted RBP23.24■■□□□ 1.31
PABPN1-202ENST00000397276 ARMC7Q9H6L4 198 aa23.24■■□□□ 1.31
PABPN1-202ENST00000397276 PCNAP12004 261 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 BOP1Q14137 746 aaKnown RBP23.23■■□□□ 1.31
PABPN1-202ENST00000397276 ISG20Q96AZ6 181 aaKnown RBP23.23■■□□□ 1.31
PABPN1-202ENST00000397276 THAP11Q96EK4 314 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.23■■□□□ 1.315e-9■■■■□ 19.8
PABPN1-202ENST00000397276 ZDHHC3Q9NYG2 299 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 EIF3LQ9Y262 564 aaKnown RBP23.23■■□□□ 1.31
PABPN1-202ENST00000397276 A0A087WXM4 84 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 H3BMQ9 156 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 NFKBIAP25963 317 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 NEK2P51955 445 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 BNIP3Q12983 259 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 AASDHQ4L235 1098 aaPredicted RBP23.23■■□□□ 1.31
PABPN1-202ENST00000397276 CBARPQ8N350 705 aaPredicted RBP23.23■■□□□ 1.31
PABPN1-202ENST00000397276 DTWD1Q8N5C7 304 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 KREMEN2Q8NCW0 462 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 MAGEE2Q8TD90 523 aaPredicted RBP23.23■■□□□ 1.31
PABPN1-202ENST00000397276 COG8Q96MW5 612 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 THUMPD3Q9BV44 507 aaKnown RBP23.23■■□□□ 1.31
PABPN1-202ENST00000397276 CHID1Q9BWS9 393 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 BRD9Q9H8M2 597 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 ACTR8Q9H981 624 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 CD97P48960 835 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 SFSWAPQ12872 951 aaKnown RBP23.23■■□□□ 1.31
PABPN1-202ENST00000397276 SPANXN4Q5MJ08 99 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 VRK3Q8IV63 474 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 NSMCE2Q96MF7 247 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 ADI1Q9BV57 179 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 DPY30Q9C005 99 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 ZBP1Q9H171 429 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 B4GALT6Q9UBX8 382 aa23.23■■□□□ 1.31
PABPN1-202ENST00000397276 ACOX3O15254 700 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 ANXA5P08758 320 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 CLTBP09497 229 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 HTR1EP28566 365 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 RFC2P35250 354 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 GNPDA1P46926 289 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 IRAK1BP1Q5VVH5 260 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 UBE2R2Q712K3 238 aaPredicted RBP23.22■■□□□ 1.31
PABPN1-202ENST00000397276 ELMOD1Q8N336 334 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 DPP10Q8N608 796 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 NAT16Q8N8M0 369 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 SCAMP4Q969E2 229 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 C9orf16Q9BUW7 83 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 LINC00597Q9H2U6 94 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 ASAH2Q9NR71 780 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 KCTD5Q9NXV2 234 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 PDE10AQ9Y233 779 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 J3QRK9 145 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 AKT1P31749 480 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 INTS11Q5TA45 600 aaKnown RBP23.22■■□□□ 1.31
PABPN1-202ENST00000397276 SUSD1Q6UWL2 747 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 SERPINA13PQ6UXR4 307 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 SLC13A3Q8WWT9 602 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 FIG4Q92562 907 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 PPP1R14BQ96C90 147 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 FBXL8Q96CD0 374 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 TBCDQ9BTW9 1192 aa23.22■■□□□ 1.31
PABPN1-202ENST00000397276 LRTM1Q9HBL6 345 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms