RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 E5RI56 91 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 RGS5O15539 181 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 KERAO60938 352 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 CREG1O75629 220 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 LRATO95237 230 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 VIPP01282 170 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 EFNA1P20827 205 aaPredicted RBP9.65□□□□□ -0.87
TRIM39-203ENST00000396547 GADD45AP24522 165 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 EIF2DP41214 584 aaKnown RBP9.65□□□□□ -0.87
TRIM39-203ENST00000396547 BRCC3P46736 316 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 ABRAXAS2Q15018 415 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF792Q3KQV3 632 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 TPRG1LQ5T0D9 272 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 ZDHHC21Q8IVQ6 265 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 UBE2J2Q8N2K1 259 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 OR5K1Q8NHB7 308 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 KIAA1191Q96A73 305 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 IMP4Q96G21 291 aaKnown RBP9.65□□□□□ -0.87
TRIM39-203ENST00000396547 Q96MT0 163 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 AARSD1Q9BTE6 412 aaKnown RBP9.65□□□□□ -0.87
TRIM39-203ENST00000396547 ZBED2Q9BTP6 218 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 APOL5Q9BWW9 433 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 PRRG3Q9BZD7 231 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 DPY30Q9C005 99 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 ARHGAP39Q9C0H5 1083 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 TFB2MQ9H5Q4 396 aaKnown RBP9.65□□□□□ -0.87
TRIM39-203ENST00000396547 PARVBQ9HBI1 364 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 NECTIN3Q9NQS3 549 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 PDP1Q9P0J1 537 aaPredicted RBP9.65□□□□□ -0.87
TRIM39-203ENST00000396547 SNX6Q9UNH7 406 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF451Q9Y4E5 1061 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 HS3ST4Q9Y661 456 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 PTCH2Q9Y6C5 1203 aa9.65□□□□□ -0.87
TRIM39-203ENST00000396547 TANC1Q9C0D5 1861 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 CCRL2O00421 344 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 DYRK3O43781 588 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 SEC22BO75396 215 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 ABCB1P08183 1280 aaPredicted RBP9.64□□□□□ -0.87
TRIM39-203ENST00000396547 OR4Q2P0C623 313 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 DARSP14868 501 aaKnown RBP9.64□□□□□ -0.87
TRIM39-203ENST00000396547 AZGP1P25311 298 aaKnown RBP9.64□□□□□ -0.87
TRIM39-203ENST00000396547 AKT1P31749 480 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 LIPAP38571 399 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 ARPP19P56211 112 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 GABARAPL2P60520 117 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 FAM189BP81408 668 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 CARD16Q5EG05 197 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 ZRANB3Q5FWF4 1079 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 COQ5Q5HYK3 327 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 PPP2R2DQ66LE6 453 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 RAP1GAP2Q684P5 730 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 C10orf111Q8N326 155 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 METTL4Q8N3J2 472 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 SVOPQ8N4V2 548 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 TTC29Q8NA56 475 aaPredicted RBP9.64□□□□□ -0.87
TRIM39-203ENST00000396547 C3orf58Q8NDZ4 430 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 SLC13A3Q8WWT9 602 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 SMARCD1Q96GM5 515 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 BTN2A3PQ96KV6 586 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 OR52E6Q96RD3 313 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF300Q96RE9 604 aaPredicted RBP9.64□□□□□ -0.87
TRIM39-203ENST00000396547 TTYH2Q9BSA4 534 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 SPON2Q9BUD6 331 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 BBS2Q9BXC9 721 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 EMILIN2Q9BXX0 1053 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 TNKS2Q9H2K2 1166 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 SYTL2Q9HCH5 934 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 SLC6A13Q9NSD5 602 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 TMLHEQ9NVH6 421 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 PCTPQ9UKL6 214 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 ANGPTL3Q9Y5C1 460 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 UPK3BL1B0FP48 263 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 UPK3BL2E5RIL1 263 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 PTGESO14684 152 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 TBX18O95935 607 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 C1QCP02747 245 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 CLK3P49761 638 aaKnown RBP9.64□□□□□ -0.87
TRIM39-203ENST00000396547 ARHGDIAP52565 204 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 HK3P52790 923 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 NFKB2Q00653 900 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 MVKQ03426 396 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 SLC14A2Q15849 920 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 NDUFA5Q16718 116 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 PRSS36Q5K4E3 855 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 GPR153Q6NV75 609 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.64□□□□□ -0.87
TRIM39-203ENST00000396547 BHLHA9Q7RTU4 235 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 P3H2Q8IVL5 708 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 PAF1Q8N7H5 531 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 OR6J1Q8NGC5 347 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 LILRB4Q8NHJ6 448 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 ACTL8Q9H568 366 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 ACOT13Q9NPJ3 140 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 FBXO8Q9NRD0 319 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 QPCTLQ9NXS2 382 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 ZIM2Q9NZV7 527 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 OPTCQ9UBM4 332 aa9.64□□□□□ -0.87
TRIM39-203ENST00000396547 TMEFF2Q9UIK5 374 aaPredicted RBP9.64□□□□□ -0.87
TRIM39-203ENST00000396547 TRMT6Q9UJA5 497 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms