RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 LCP2Q13094 533 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 GTF2H2Q13888 395 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 FZD2Q14332 565 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 RBBP7Q16576 425 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 SH2D4BQ5SQS7 431 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 CAPRIN2Q6IMN6 1127 aaKnown RBP19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 GTF2H2CQ6P1K8 395 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 METTL2BQ6P1Q9 378 aaKnown RBP19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 TTC23LQ6PF05 361 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 LONP2Q86WA8 852 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 ANKS4BQ8N8V4 417 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 TMEM105Q8N8V8 129 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 ATL1Q8WXF7 558 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 PKP4Q99569 1192 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 MID1IP1Q9NPA3 183 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 TRNAU1APQ9NX07 287 aaKnown RBP19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 CIDEBQ9UHD4 219 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 WDR37Q9Y2I8 494 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 ANGPTL3Q9Y5C1 460 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 ST14Q9Y5Y6 855 aa19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 CFAP20Q9Y6A4 193 aaKnown RBP19.89■□□□□ 0.77
VCPKMT-202ENST00000395860 TP53BP1Q12888 1972 aaPredicted RBP19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 PDZK1P1A8MUH7 402 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 UBFD1O14562 309 aaKnown RBP19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 STK16O75716 305 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 MLYCDO95822 493 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 AK4P27144 223 aaPredicted RBP19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 GDF5P43026 501 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 EIF2B5Q13144 721 aaKnown RBP19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 TCEA2Q15560 299 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 WDR45BQ5MNZ6 344 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 ARMCX6Q7L4S7 300 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 LPCAT2Q7L5N7 544 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 GOLGA7Q7Z5G4 137 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 IQCHQ86VS3 1027 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 TEX9Q8N6V9 391 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 PHC3Q8NDX5 983 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 OR5AR1Q8NGP9 310 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 C12orf66Q96MD2 445 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 SIKE1Q9BRV8 207 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 ZBTB26Q9HCK0 441 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 TM9SF3Q9HD45 589 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 ARL2BPQ9Y2Y0 163 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 USH1CQ9Y6N9 552 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 A0A1W2PR77 199 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 K7EPI3 171 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 PPP6CO00743 305 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 WNT1P04628 370 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 HK2P52789 917 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 ARFIP2P53365 341 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 SH3BP2P78314 561 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 UAP1L1Q3KQV9 507 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 LAYNQ6UX15 382 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 PARGQ86W56 976 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 DCUN1D3Q8IWE4 304 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 KIRREL3Q8IZU9 778 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 OR5K2Q8NHB8 316 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 C10orf82Q8WW14 230 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 RAD51AP1Q96B01 352 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 INSM2Q96T92 566 aaPredicted RBP19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 ATG10Q9H0Y0 220 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 TRIT1Q9H3H1 467 aaKnown RBP19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 SLC32A1Q9H598 525 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 KCNK13Q9HB14 408 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 PRDM8Q9NQV8 689 aa19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 STOX2Q9P2F5 926 aaPredicted RBP19.88■□□□□ 0.77
VCPKMT-202ENST00000395860 MYO1CO00159 1063 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 GIPC1O14908 333 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 ACTR1BP42025 376 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 BLKP51451 505 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 AQP5P55064 265 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 ACTR1AP61163 376 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 ILF3Q12906 894 aaKnown RBP eCLIP19.87■□□□□ 0.772e-6■■■■□ 21.4
VCPKMT-202ENST00000395860 PTCHD3Q3KNS1 767 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 ZNF542PQ5EBM4 170 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 AGTRAPQ6RW13 159 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 LRRC70Q7Z2Q7 622 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 MAML2Q8IZL2 1156 aaPredicted RBP19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 AFAP1L2Q8N4X5 818 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 DTWD2Q8NBA8 298 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 OR9A1PQ8NGU1 263 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 CCL4L1Q8NHW4 92 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 DNASE2BQ8WZ79 361 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 TMEM120AQ9BXJ8 343 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 NOL11Q9H8H0 719 aaKnown RBP19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 KCNK4Q9NYG8 393 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 TDRKHQ9Y2W6 561 aaKnown RBP19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 FIS1Q9Y3D6 152 aa19.87■□□□□ 0.77
VCPKMT-202ENST00000395860 SLCO1B7G3V0H7 640 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 TLR4O00206 839 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 WDR47O94967 919 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 SLC16A8O95907 504 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 ARL1P40616 181 aaPredicted RBP19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 HALP42357 657 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 SLC6A12P48065 614 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 PIK3CGP48736 1102 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 CLCA4Q14CN2 919 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 ZXDCQ2QGD7 858 aaPredicted RBP19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 SLC30A9Q6PML9 568 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 AGAP11Q8TF27 550 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms