RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ICKQ9UPZ9 632 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 FAM159BA6NKW6 160 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 PLD2O14939 933 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 BRINP1O60477 761 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 CCL4P13236 92 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 ITIH1P19827 911 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 ATP5DP30049 168 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 PMS2P54278 862 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 TRA2AQ13595 282 aaKnown RBP eCLIP16.07■□□□□ 0.16
CXCL1-201ENST00000395761 GRB7Q14451 532 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 KYNUQ16719 465 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 KLHL38Q2WGJ6 581 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 CCSMST1Q4G0I0 132 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 HECTD2Q5U5R9 776 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 KLHL35Q6PF15 583 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 UNC5DQ6UXZ4 953 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 CYHR1Q6ZMK1 362 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 SLC26A11Q86WA9 606 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 ZC3HC1Q86WB0 502 aaKnown RBP16.07■□□□□ 0.16
CXCL1-201ENST00000395761 AMIGO1Q86WK6 493 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 MREGQ8N565 214 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 GPATCH11Q8N954 259 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 LMNTD1Q8N9Z9 388 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 PPM1MQ96MI6 270 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 MCMBPQ9BTE3 642 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 FUT8Q9BYC5 575 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 RAB33BQ9H082 229 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 NINJ2Q9NZG7 142 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 POLG2Q9UHN1 485 aa16.07■□□□□ 0.16
CXCL1-201ENST00000395761 KRT87PA6NCN2 255 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 BTN3A1O00481 513 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 HGSO14964 777 aaPredicted RBP16.06■□□□□ 0.16
CXCL1-201ENST00000395761 MATN4O95460 622 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 C1orf105O95561 183 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 ETV5P41161 510 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 BDKRB1P46663 353 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 EIF3IQ13347 325 aaKnown RBP16.06■□□□□ 0.16
CXCL1-201ENST00000395761 KBTBD12Q3ZCT8 623 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 ARMC6Q6NXE6 501 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 PAQR3Q6TCH7 311 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 OOSP2Q86WS3 158 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 CPNE9Q8IYJ1 553 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 ADGRF3Q8IZF5 1079 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 FBF1Q8TES7 1133 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 ZDHHC12Q96GR4 267 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 SLC46A1Q96NT5 459 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 OLFM1Q99784 485 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 CMKLR1Q99788 373 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 CCDC86Q9H6F5 360 aaKnown RBP16.06■□□□□ 0.16
CXCL1-201ENST00000395761 OCIAD1Q9NX40 245 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 PISDQ9UG56 409 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 TRMT6Q9UJA5 497 aaKnown RBP16.06■□□□□ 0.16
CXCL1-201ENST00000395761 VWA7Q9Y334 891 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 PCDHGA8Q9Y5G5 932 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 ASPMQ8IZT6 3477 aa16.06■□□□□ 0.16
CXCL1-201ENST00000395761 UQCRHLA0A096LP55 91 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 RASSF9O75901 435 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 TNFSF15O95150 251 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 UQCRHP07919 91 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 ABHD2P08910 425 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 FGF3P11487 239 aaPredicted RBP16.05■□□□□ 0.16
CXCL1-201ENST00000395761 H2AFXP16104 143 aaPredicted RBP16.05■□□□□ 0.16
CXCL1-201ENST00000395761 FDXRP22570 491 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 CSTF2P33240 577 aaKnown RBP eCLIP16.05■□□□□ 0.16
CXCL1-201ENST00000395761 SEPHS1P49903 392 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 KPNA2P52292 529 aaKnown RBP16.05■□□□□ 0.16
CXCL1-201ENST00000395761 TTLL9Q3SXZ7 439 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 BEND6Q5SZJ8 279 aaPredicted RBP16.05■□□□□ 0.16
CXCL1-201ENST00000395761 CACHD1Q5VU97 1274 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 FBXO38Q6PIJ6 1188 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 PIWIL4Q7Z3Z4 852 aaKnown RBP16.05■□□□□ 0.16
CXCL1-201ENST00000395761 DCUN1D3Q8IWE4 304 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 AGBL5Q8NDL9 886 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 EEF1AKMT1Q8WVE0 214 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 ELMO2Q96JJ3 720 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 FOPNLQ96NB1 174 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 IL17FQ96PD4 163 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 MAP3K3Q99759 626 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 MENTQ9BUN1 341 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 ASCL3Q9NQ33 180 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 NSMCE4AQ9NXX6 385 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 TAS2R13Q9NYV9 303 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 IGF2RP11717 2491 aa16.05■□□□□ 0.16
CXCL1-201ENST00000395761 ACACBO00763 2458 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 IGHV5-51A0A0C4DH38 117 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 FAM95CA0A1B0GW59 222 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 GSAPA4D1B5 854 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 EFCAB7A8K855 629 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 ARHGEF33A8MVX0 844 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 TAF4O00268 1085 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 RIPK2O43353 540 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 RPN2P04844 631 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 ANKRD34CP0C6C1 535 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 JMJD7P0C870 316 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 SAT1P21673 171 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 CD9P21926 228 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 RBMS1P29558 406 aaKnown RBP16.04■□□□□ 0.16
CXCL1-201ENST00000395761 SHMT2P34897 504 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 PHBP35232 272 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 SKIV2L2P42285 1042 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms