RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 CREG1O75629 220 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 FKBP9O95302 570 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 VIPP01282 170 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 PRR35P0CG20 571 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 TBX4P57082 545 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 MANEALQ5VSG8 457 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 OVOS1Q6IE37 1185 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 GPR153Q6NV75 609 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 FKBP9P1Q75LS8 142 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 ADHFE1Q8IWW8 467 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 RHEBL1Q8TAI7 183 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 RHBDF1Q96CC6 855 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 ZIM2Q9NZV7 527 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 PTCH2Q9Y6C5 1203 aa14.04□□□□□ -0.16
CLIP2-203ENST00000395060 PLXNA1Q9UIW2 1896 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 TSC2P49815 1807 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 LOC285556D6RIA3 1793 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 KRT87PA6NCN2 255 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 RRN3P2A6NIE6 340 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 VASH1Q7L8A9 365 aaPredicted RBP14.03□□□□□ -0.16
CLIP2-203ENST00000395060 ZDHHC21Q8IVQ6 265 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 DYNC2LI1Q8TCX1 351 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 ATL1Q8WXF7 558 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 BHMTQ93088 406 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 ZBTB18Q99592 522 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 ZYG11BQ9C0D3 744 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 TRIT1Q9H3H1 467 aaKnown RBP14.03□□□□□ -0.16
CLIP2-203ENST00000395060 TRMT13Q9NUP7 481 aaKnown RBP14.03□□□□□ -0.16
CLIP2-203ENST00000395060 PDP1Q9P0J1 537 aaPredicted RBP14.03□□□□□ -0.16
CLIP2-203ENST00000395060 ST3GAL5Q9UNP4 418 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 H0Y626 953 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 PER2O15055 1255 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 SLC22A1O15245 554 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 TPD52L2O43399 206 aaKnown RBP14.03□□□□□ -0.16
CLIP2-203ENST00000395060 TRIM16O95361 564 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 IL2P60568 153 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 SEMG2Q02383 582 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 COQ5Q5HYK3 327 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 GOLGA7Q7Z5G4 137 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 METTL23Q86XA0 190 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 RASAL3Q86YV0 1011 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 MSRB3Q8IXL7 192 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 CLDN19Q8N6F1 224 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 GTF2H4Q92759 462 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 ZNF641Q96N77 438 aaPredicted RBP14.03□□□□□ -0.16
CLIP2-203ENST00000395060 DERL2Q9GZP9 239 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 ATP13A1Q9HD20 1204 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 FAM105AQ9NUU6 356 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 NEUROG3Q9Y4Z2 214 aa14.03□□□□□ -0.16
CLIP2-203ENST00000395060 LCHNA4D1U4 455 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 VPS26AO75436 327 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 ALOX5P09917 674 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 AKT1P31749 480 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 MC4RP32245 332 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 CLK3P49761 638 aaKnown RBP14.02□□□□□ -0.16
CLIP2-203ENST00000395060 ZXDBP98169 803 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 CBX2Q14781 532 aaPredicted RBP14.02□□□□□ -0.16
CLIP2-203ENST00000395060 CPSF6Q16630 551 aaKnown RBP eCLIP14.02□□□□□ -0.16
CLIP2-203ENST00000395060 BRMS1LQ5PSV4 323 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 MSANTD2Q6P1R3 559 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 LYSMD2Q8IV50 215 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 MDGA1Q8NFP4 955 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 TPD52L3Q96J77 140 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 DPH2Q9BQC3 489 aaPredicted RBP14.02□□□□□ -0.16
CLIP2-203ENST00000395060 POLR1EQ9GZS1 481 aaKnown RBP14.02□□□□□ -0.16
CLIP2-203ENST00000395060 SCN3BQ9NY72 215 aa14.02□□□□□ -0.16
CLIP2-203ENST00000395060 EIF3LQ9Y262 564 aaKnown RBP14.02□□□□□ -0.16
CLIP2-203ENST00000395060 KRT75O95678 551 aa14.02□□□□□ -0.17
CLIP2-203ENST00000395060 LIPAP38571 399 aa14.02□□□□□ -0.17
CLIP2-203ENST00000395060 DAPP51397 102 aa14.02□□□□□ -0.17
CLIP2-203ENST00000395060 RACK1P63244 317 aaKnown RBP14.02□□□□□ -0.17
CLIP2-203ENST00000395060 IFITM2Q01629 132 aa14.02□□□□□ -0.17
CLIP2-203ENST00000395060 TRAF3Q13114 568 aa14.02□□□□□ -0.17
CLIP2-203ENST00000395060 KLHDC8BQ8IXV7 354 aa14.02□□□□□ -0.17
CLIP2-203ENST00000395060 BRSK1Q8TDC3 778 aa14.02□□□□□ -0.17
CLIP2-203ENST00000395060 Q96MT0 163 aa14.02□□□□□ -0.17
CLIP2-203ENST00000395060 PARK7Q99497 189 aaKnown RBP14.02□□□□□ -0.17
CLIP2-203ENST00000395060 SLIRPQ9GZT3 109 aaKnown RBP14.02□□□□□ -0.17
CLIP2-203ENST00000395060 AP3D1O14617 1153 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 RGS10O43665 173 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 PGRP06401 933 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 GADD45AP24522 165 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 CA8P35219 290 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 SLC26A3P40879 764 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 PSEN2P49810 448 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 CRISP3P54108 245 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 ZNF33AQ06730 810 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 SLC14A1Q13336 389 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 BCL2A1Q16548 175 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 LRIT3Q3SXY7 679 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 RNF175Q8N4F7 328 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 OR5K1Q8NHB7 308 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 TAS2R16Q9NYV7 291 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 USP34Q70CQ2 3546 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 SMIM35A0A1B0GVV1 85 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 RFPL2O75678 378 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 CCNKO75909 580 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 IGLV3-25P01717 112 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 SERPINF2P08697 491 aa14.01□□□□□ -0.17
CLIP2-203ENST00000395060 ODC1P11926 461 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms