RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 OSBPL2Q9H1P3 480 aa10.21□□□□□ -0.78
COL4A6-203ENST00000394872 DTLQ9NZJ0 730 aa10.21□□□□□ -0.78
COL4A6-203ENST00000394872 PCDH7O60245 1069 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 THRBP10828 461 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 PBX1P40424 430 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 GMFBP60983 142 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 VBP1P61758 197 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 RPS14P62263 151 aaKnown RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 MAPK14Q16539 360 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 QPCTQ16769 361 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 THAP5Q7Z6K1 395 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 IRF2BP1Q8IU81 584 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 MIPEPQ99797 713 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 TRIM2Q9C040 744 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 WDR12Q9GZL7 423 aaKnown RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 TPK1Q9H3S4 243 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 XPNPEP1Q9NQW7 623 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 FBXL12Q9NXK8 326 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 WBP11Q9Y2W2 641 aaKnown RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF879B4DU55 563 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 K7EPI3 171 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 RNF225M0QZC1 329 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 GABRDO14764 452 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 GSC2O15499 205 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 MPZL2O60487 215 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 NPHS1O60500 1241 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 UGT1A9O60656 530 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 CHRNA1P02708 482 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 POU2F1P14859 743 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 UGT1A6P19224 532 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 UGT1A1P22309 533 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 UGT1A4P22310 534 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 UGT1A3P35503 534 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 NFKB2Q00653 900 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 PRKD1Q15139 912 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 TEAD2Q15562 447 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 C5orf22Q49AR2 442 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 TXNDC8Q6A555 127 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 CNTD1Q8N815 330 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 CCDC54Q8NEL0 328 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 GIPC3Q8TF64 312 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 CEP295NLQ96MC4 621 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 IFT27Q9BW83 186 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 UGT1A7Q9HAW7 530 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 UGT1A10Q9HAW8 530 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 UGT1A8Q9HAW9 530 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 RPL26L1Q9UNX3 145 aaKnown RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 AK5Q9Y6K8 562 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 IGKV6D-41A0A0C4DH26 115 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 CAPN14A8MX76 684 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 SCELO95171 688 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 RENP00797 406 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 MT-ND1P03886 318 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 SLC7A1P30825 629 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 VIPR1P32241 457 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 PUDPQ08623 228 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 MBOAT1Q6ZNC8 495 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 SLC29A4Q7RTT9 530 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 GRASPQ7Z6J2 395 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 LMX1AQ8TE12 382 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 C11orf24Q96F05 449 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 CLPTM1LQ96KA5 538 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 FAM210AQ96ND0 272 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 CCM2Q9BSQ5 444 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 TBL1XR1Q9BZK7 514 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 BTBD1Q9H0C5 482 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 OR51V1Q9H2C8 321 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 A0A0X1KG70 313 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 RBM47A0AV96 593 aaKnown RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 WRBO00258 174 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 NDUFS4O43181 175 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 HLA-DQB2P05538 268 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 IFI44LQ53G44 452 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 SYPL2Q5VXT5 272 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 UTS2BQ765I0 119 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 LRRTM4Q86VH4 590 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF366Q8N895 744 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF599Q96NL3 588 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 NDC1Q9BTX1 674 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 ZSCAN5AQ9BUG6 496 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 ADAP2Q9NPF8 381 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 SERINC1Q9NRX5 453 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 NKIRAS2Q9NYR9 191 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 MED1Q15648 1581 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 SLC30A4O14863 429 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 GADD45GO95257 159 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 NCK1P16333 377 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 SLBPQ14493 270 aaKnown RBP eCLIP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 SLC9B1Q4ZJI4 515 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF776Q68DI1 518 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 BICRALQ6AI39 1079 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 TNFAIP8L2Q6P589 184 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 KCTD8Q6ZWB6 473 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 SLC51AQ86UW1 340 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 FSTL5Q8N475 847 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 Q8N9G6 341 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF527Q8NB42 609 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 TRPV1Q8NER1 839 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 NPLOC4Q8TAT6 608 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms