RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 CNPP09543 421 aaKnown RBP9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 ZDHHC11BP0C7U3 371 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 CBSLP0DN79 551 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 S100A3P33764 101 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 CBSP35520 551 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 ATP5C1P36542 298 aaKnown RBP9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 MAGEA2P43356 314 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 OR1G1P47890 313 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 MAPK10P53779 464 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 TUBA1BP68363 451 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 SPCS2Q15005 226 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 CTF1Q16619 201 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 DPY19L1Q2PZI1 675 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 PLEKHG6Q3KR16 790 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 FBXO48Q5FWF7 155 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 CAPN13Q6MZZ7 669 aaPredicted RBP9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 TUBA3EQ6PEY2 450 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 SBSNQ6UWP8 590 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 TUBA1AQ71U36 451 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 CALHM3Q86XJ0 350 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 TCAIMQ8N3R3 496 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 LIX1Q8N485 282 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 EFHBQ8N7U6 833 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 C2orf69Q8N8R5 385 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 OR7D4Q8NG98 312 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 MCOLN3Q8TDD5 553 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 RPL10LQ96L21 214 aaKnown RBP9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 CSF3RQ99062 836 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 GPR63Q9BZJ6 419 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 ZNF490Q9ULM2 529 aaPredicted RBP9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 CORINQ9Y5Q5 1042 aa9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 ZFP37Q9Y6Q3 630 aaPredicted RBP9.84□□□□□ -0.83
UBE2D3-208ENST00000394803 A0A0D9SEW6 157 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 SAGE2PA6NJ88 616 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 KDM1AO60341 852 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 OR1I1O60431 355 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 GJB3O75712 270 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 TBX18O95935 607 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 SERPINA1P01009 418 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 PRLP01236 227 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 COL6A1P12109 1028 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 ITGALP20701 1170 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 GPR15P49685 360 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 GP2P55259 537 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 CLDN8P56748 225 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 NKX3-2P78367 333 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 KRR1Q13601 381 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 CCL14Q16627 93 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 CTU2Q2VPK5 515 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 CCDC92Q53HC0 331 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 SYT6Q5T7P8 510 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 CXCL17Q6UXB2 119 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 FAM43BQ6ZT52 329 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 SPNS2Q8IVW8 549 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 PGBD3Q8N328 593 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 FAR1Q8WVX9 515 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 GLMNQ92990 594 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 ESAMQ96AP7 390 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 EFHD2Q96C19 240 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 ABHD8Q96I13 439 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 CPPED1Q9BRF8 314 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 PARVBQ9HBI1 364 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 KLHL42Q9P2K6 505 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 INTS6Q9UL03 887 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 CCL27Q9Y4X3 112 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 PCDHGA4Q9Y5G9 962 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 TRBV5-3A0A0A0MS03 114 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 PTGES3LE9PB15 166 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 EIF3FO00303 357 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 MANBAO00462 879 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 RGS10O43665 173 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 NADKO95544 446 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 HTR1AP08908 422 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 CD40LGP29965 261 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 DNAJA1P31689 397 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 HMGCLP35914 325 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 PIGAP37287 484 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 HALP42357 657 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 EIF2B2P49770 351 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 RPS14P62263 151 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 EMX1Q04741 257 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 ZNF33BQ06732 778 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 ELAVL2Q12926 359 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 FADDQ13158 208 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 GPR17Q13304 367 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 INO80DQ53TQ3 878 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 SPANXN4Q5MJ08 99 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 AGAP7PQ5VUJ5 663 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 MFSD14CQ5VZR4 134 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 FAM219BQ5XKK7 198 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 GCNT7Q6ZNI0 430 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 LACC1Q8IV20 430 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 ZDHHC21Q8IVQ6 265 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 STARD8Q92502 1023 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 USP7Q93009 1102 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 TESCQ96BS2 214 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 RHBDF1Q96CC6 855 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 SPATA9Q9BWV2 254 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 DUSP21Q9H596 190 aa9.83□□□□□ -0.84
UBE2D3-208ENST00000394803 CWH43Q9H720 699 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms